Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC106827.1-201ENST00000366454 431 ntBASIC17.42■□□□□ 0.38
COL4A5P29400 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A5P29400 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A5P29400 AL357373.1-201ENST00000394974 322 ntBASIC17.42■□□□□ 0.38
COL4A5P29400 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A5P29400 ACTG1P19-201ENST00000418987 1116 ntBASIC17.42■□□□□ 0.38
COL4A5P29400 PPP1R2P4-201ENST00000424051 595 ntBASIC17.42■□□□□ 0.38
COL4A5P29400 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A5P29400 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
COL4A5P29400 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC17.42■□□□□ 0.38
COL4A5P29400 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A5P29400 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A5P29400 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC17.42■□□□□ 0.38
COL4A5P29400 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC17.42■□□□□ 0.38
COL4A5P29400 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A5P29400 AC008972.2-201ENST00000606587 494 ntBASIC17.42■□□□□ 0.38
COL4A5P29400 MME-218ENST00000625667 363 ntTSL 5 BASIC17.42■□□□□ 0.38
COL4A5P29400 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A5P29400 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A5P29400 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
COL4A5P29400 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A5P29400 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A5P29400 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A5P29400 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A5P29400 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A5P29400 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.42■□□□□ 0.38
COL4A5P29400 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A5P29400 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC17.42■□□□□ 0.38
COL4A5P29400 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.42■□□□□ 0.38
COL4A5P29400 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.42■□□□□ 0.38
COL4A5P29400 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.42■□□□□ 0.38
COL4A5P29400 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A5P29400 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A5P29400 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.42■□□□□ 0.38
COL4A5P29400 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A5P29400 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A5P29400 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.42■□□□□ 0.38
COL4A5P29400 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A5P29400 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
COL4A5P29400 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC17.42■□□□□ 0.38
COL4A5P29400 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC17.42■□□□□ 0.38
COL4A5P29400 AC098934.1-203ENST00000442868 1262 ntBASIC17.42■□□□□ 0.38
COL4A5P29400 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC17.42■□□□□ 0.38
COL4A5P29400 CISD2-202ENST00000503643 808 ntTSL 2 BASIC17.42■□□□□ 0.38
COL4A5P29400 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC17.42■□□□□ 0.38
COL4A5P29400 NDUFB10P1-201ENST00000567319 521 ntBASIC17.42■□□□□ 0.38
COL4A5P29400 MBP-238ENST00000580402 915 ntTSL 5 BASIC17.42■□□□□ 0.38
COL4A5P29400 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC17.42■□□□□ 0.38
COL4A5P29400 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL4A5P29400 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC17.42■□□□□ 0.38
COL4A5P29400 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A5P29400 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A5P29400 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.41■□□□□ 0.38
COL4A5P29400 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A5P29400 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.41■□□□□ 0.38
COL4A5P29400 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A5P29400 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A5P29400 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
COL4A5P29400 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
COL4A5P29400 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
COL4A5P29400 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A5P29400 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
COL4A5P29400 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A5P29400 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A5P29400 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
COL4A5P29400 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC17.41■□□□□ 0.38
COL4A5P29400 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC17.41■□□□□ 0.38
COL4A5P29400 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC17.41■□□□□ 0.38
COL4A5P29400 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
COL4A5P29400 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
COL4A5P29400 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.41■□□□□ 0.38
COL4A5P29400 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A5P29400 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A5P29400 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A5P29400 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL4A5P29400 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.4■□□□□ 0.38
COL4A5P29400 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
COL4A5P29400 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.4■□□□□ 0.38
COL4A5P29400 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A5P29400 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A5P29400 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A5P29400 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
COL4A5P29400 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.4■□□□□ 0.38
COL4A5P29400 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
COL4A5P29400 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A5P29400 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC17.4■□□□□ 0.38
COL4A5P29400 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC17.4■□□□□ 0.38
COL4A5P29400 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC17.4■□□□□ 0.38
COL4A5P29400 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
COL4A5P29400 CYP4F36P-201ENST00000589193 186 ntBASIC17.4■□□□□ 0.38
COL4A5P29400 AL591471.1-201ENST00000621855 229 ntBASIC17.4■□□□□ 0.38
COL4A5P29400 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.4■□□□□ 0.38
COL4A5P29400 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A5P29400 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A5P29400 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC17.4■□□□□ 0.38
COL4A5P29400 AC019109.1-201ENST00000401725 1874 ntBASIC17.4■□□□□ 0.38
COL4A5P29400 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
COL4A5P29400 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL4A5P29400 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
COL4A5P29400 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms