Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.22□□□□□ -0.13
MT-ND1P03886 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
MT-ND1P03886 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MT-ND1P03886 AC104457.1-201ENST00000401024 814 ntBASIC14.22□□□□□ -0.13
MT-ND1P03886 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.22□□□□□ -0.13
MT-ND1P03886 AC254562.1-201ENST00000417586 456 ntBASIC14.22□□□□□ -0.13
MT-ND1P03886 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.22□□□□□ -0.13
MT-ND1P03886 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.22□□□□□ -0.13
MT-ND1P03886 TPT1P11-201ENST00000458482 498 ntBASIC14.22□□□□□ -0.13
MT-ND1P03886 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.22□□□□□ -0.13
MT-ND1P03886 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.22□□□□□ -0.13
MT-ND1P03886 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.22□□□□□ -0.13
MT-ND1P03886 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.22□□□□□ -0.13
MT-ND1P03886 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.22□□□□□ -0.13
MT-ND1P03886 AL079307.3-201ENST00000556114 283 ntBASIC14.22□□□□□ -0.13
MT-ND1P03886 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
MT-ND1P03886 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.22□□□□□ -0.13
MT-ND1P03886 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.22□□□□□ -0.13
MT-ND1P03886 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.22□□□□□ -0.13
MT-ND1P03886 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.22□□□□□ -0.13
MT-ND1P03886 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.22□□□□□ -0.13
MT-ND1P03886 AF228730.6-201ENST00000641497 218 ntBASIC14.22□□□□□ -0.13
MT-ND1P03886 AC084121.3-201ENST00000641716 218 ntBASIC14.22□□□□□ -0.13
MT-ND1P03886 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
MT-ND1P03886 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.22□□□□□ -0.13
MT-ND1P03886 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MT-ND1P03886 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.22□□□□□ -0.13
MT-ND1P03886 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.22□□□□□ -0.13
MT-ND1P03886 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.22□□□□□ -0.13
MT-ND1P03886 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.22□□□□□ -0.13
MT-ND1P03886 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
MT-ND1P03886 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.22□□□□□ -0.13
MT-ND1P03886 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
MT-ND1P03886 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MT-ND1P03886 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MT-ND1P03886 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.21□□□□□ -0.13
MT-ND1P03886 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
MT-ND1P03886 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
MT-ND1P03886 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
MT-ND1P03886 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MT-ND1P03886 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
MT-ND1P03886 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MT-ND1P03886 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
MT-ND1P03886 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.21□□□□□ -0.13
MT-ND1P03886 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MT-ND1P03886 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
MT-ND1P03886 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.21□□□□□ -0.13
MT-ND1P03886 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MT-ND1P03886 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MT-ND1P03886 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.21□□□□□ -0.13
MT-ND1P03886 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
MT-ND1P03886 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
MT-ND1P03886 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MT-ND1P03886 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MT-ND1P03886 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.21□□□□□ -0.13
MT-ND1P03886 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.21□□□□□ -0.13
MT-ND1P03886 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.21□□□□□ -0.13
MT-ND1P03886 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MT-ND1P03886 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
MT-ND1P03886 AL512356.2-201ENST00000546955 174 ntBASIC14.21□□□□□ -0.13
MT-ND1P03886 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.21□□□□□ -0.13
MT-ND1P03886 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.21□□□□□ -0.13
MT-ND1P03886 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.21□□□□□ -0.13
MT-ND1P03886 MIR6069-201ENST00000620069 79 ntBASIC14.21□□□□□ -0.13
MT-ND1P03886 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
MT-ND1P03886 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
MT-ND1P03886 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
MT-ND1P03886 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
MT-ND1P03886 CICP16-201ENST00000502609 2813 ntBASIC14.21□□□□□ -0.14
MT-ND1P03886 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
MT-ND1P03886 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
MT-ND1P03886 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.21□□□□□ -0.14
MT-ND1P03886 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
MT-ND1P03886 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
MT-ND1P03886 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
MT-ND1P03886 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.21□□□□□ -0.14
MT-ND1P03886 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
MT-ND1P03886 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
MT-ND1P03886 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.21□□□□□ -0.14
MT-ND1P03886 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
MT-ND1P03886 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms