Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SATB2Q9UPW6 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SATB2Q9UPW6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.8□□□□□ -0.04
SATB2Q9UPW6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.8□□□□□ -0.04
SATB2Q9UPW6 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
SATB2Q9UPW6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SATB2Q9UPW6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 AKR7A2P1-201ENST00000460134 915 ntBASIC14.79□□□□□ -0.04
SATB2Q9UPW6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 RNA5SP486-201ENST00000515961 83 ntBASIC14.79□□□□□ -0.04
SATB2Q9UPW6 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 AC106872.11-201ENST00000605838 421 ntBASIC14.79□□□□□ -0.04
SATB2Q9UPW6 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SATB2Q9UPW6 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 AP006547.1-201ENST00000563435 692 ntBASIC14.78□□□□□ -0.04
SATB2Q9UPW6 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 AC104982.3-201ENST00000581995 514 ntBASIC14.78□□□□□ -0.04
SATB2Q9UPW6 RN7SL190P-201ENST00000582519 257 ntBASIC14.78□□□□□ -0.04
SATB2Q9UPW6 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 BX539320.1-201ENST00000623759 877 ntBASIC14.78□□□□□ -0.04
SATB2Q9UPW6 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SATB2Q9UPW6 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms