Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 FES-203ENST00000394302 2133 ntTSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 GHSR-202ENST00000427970 912 ntBASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 KRT8P37-201ENST00000451609 1420 ntBASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AL513480.1-201ENST00000451731 511 ntBASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AC136632.2-201ENST00000512891 861 ntBASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 PRYP6-201ENST00000514804 343 ntBASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AC109635.5-201ENST00000533593 962 ntBASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AC084364.1-201ENST00000551967 1556 ntBASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 KRT8P22-201ENST00000562317 1415 ntBASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 PAN3-AS1-201ENST00000563843 1351 ntBASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 MIR3908-201ENST00000579798 126 ntBASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AP000845.1-201ENST00000581677 2131 ntBASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 SPTSSB-204ENST00000617024 1292 ntBASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 MIR1199-201ENST00000621445 119 ntBASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AL109976.1-201ENST00000621919 5678 ntBASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AC130686.1-201ENST00000622936 2466 ntBASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC4.08□□□□□ -1.76
LCE3DQ9BYE3 AC005785.2-201ENST00000624655 631 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms