Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6BP35913 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE6BP35913 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6BP35913 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC18.25■□□□□ 0.51
PDE6BP35913 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC18.25■□□□□ 0.51
PDE6BP35913 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6BP35913 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC18.25■□□□□ 0.51
PDE6BP35913 RN7SL470P-201ENST00000583069 259 ntBASIC18.25■□□□□ 0.51
PDE6BP35913 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6BP35913 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC18.25■□□□□ 0.51
PDE6BP35913 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6BP35913 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PDE6BP35913 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6BP35913 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6BP35913 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.25■□□□□ 0.51
PDE6BP35913 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6BP35913 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6BP35913 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PDE6BP35913 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6BP35913 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6BP35913 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.24■□□□□ 0.51
PDE6BP35913 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6BP35913 MARK2P16-201ENST00000605714 1723 ntBASIC18.24■□□□□ 0.51
PDE6BP35913 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6BP35913 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PDE6BP35913 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6BP35913 AL354861.1-201ENST00000445213 355 ntBASIC18.24■□□□□ 0.51
PDE6BP35913 DUX4L50-201ENST00000455245 715 ntBASIC18.24■□□□□ 0.51
PDE6BP35913 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PDE6BP35913 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC18.24■□□□□ 0.51
PDE6BP35913 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6BP35913 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6BP35913 MIR3180-2-201ENST00000581748 88 ntBASIC18.24■□□□□ 0.51
PDE6BP35913 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PDE6BP35913 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC18.24■□□□□ 0.51
PDE6BP35913 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PDE6BP35913 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC18.24■□□□□ 0.51
PDE6BP35913 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC18.24■□□□□ 0.51
PDE6BP35913 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.24■□□□□ 0.51
PDE6BP35913 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.24■□□□□ 0.51
PDE6BP35913 ANKRD26P3-201ENST00000454044 2748 ntBASIC18.24■□□□□ 0.51
PDE6BP35913 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6BP35913 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6BP35913 LINC00554-201ENST00000564841 3011 ntBASIC18.24■□□□□ 0.51
PDE6BP35913 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6BP35913 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.24■□□□□ 0.51
PDE6BP35913 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6BP35913 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC18.24■□□□□ 0.51
PDE6BP35913 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PDE6BP35913 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PDE6BP35913 FER1L4-210ENST00000615531 5998 ntBASIC18.24■□□□□ 0.51
PDE6BP35913 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6BP35913 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PDE6BP35913 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6BP35913 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6BP35913 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6BP35913 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6BP35913 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
PDE6BP35913 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PDE6BP35913 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PDE6BP35913 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6BP35913 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PDE6BP35913 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.23■□□□□ 0.51
PDE6BP35913 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6BP35913 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6BP35913 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6BP35913 HLA-DMA-203ENST00000395305 777 ntBASIC18.23■□□□□ 0.51
PDE6BP35913 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC18.23■□□□□ 0.51
PDE6BP35913 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6BP35913 PPOX-204ENST00000462866 473 ntTSL 5 BASIC18.23■□□□□ 0.51
PDE6BP35913 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PDE6BP35913 REEP5-205ENST00000504247 480 ntTSL 5 BASIC18.23■□□□□ 0.51
PDE6BP35913 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC18.23■□□□□ 0.51
PDE6BP35913 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC18.23■□□□□ 0.51
PDE6BP35913 AP000911.2-201ENST00000534330 502 ntBASIC18.23■□□□□ 0.51
PDE6BP35913 AC003686.1-201ENST00000550956 1034 ntBASIC18.23■□□□□ 0.51
PDE6BP35913 C2orf69P1-201ENST00000563532 1093 ntBASIC18.23■□□□□ 0.51
PDE6BP35913 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6BP35913 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC18.23■□□□□ 0.51
PDE6BP35913 FO393412.1-201ENST00000619841 382 ntBASIC18.23■□□□□ 0.51
PDE6BP35913 AC138466.4-201ENST00000623965 852 ntBASIC18.23■□□□□ 0.51
PDE6BP35913 CMC2-224ENST00000630396 481 ntTSL 5 BASIC18.23■□□□□ 0.51
PDE6BP35913 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PDE6BP35913 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6BP35913 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.23■□□□□ 0.51
PDE6BP35913 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC18.23■□□□□ 0.51
PDE6BP35913 AP000845.1-201ENST00000581677 2131 ntBASIC18.23■□□□□ 0.51
PDE6BP35913 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6BP35913 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PDE6BP35913 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC18.23■□□□□ 0.51
PDE6BP35913 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PDE6BP35913 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.23■□□□□ 0.51
PDE6BP35913 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PDE6BP35913 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PDE6BP35913 PRAL-201ENST00000624952 3286 ntBASIC18.22■□□□□ 0.51
PDE6BP35913 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.22■□□□□ 0.51
PDE6BP35913 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6BP35913 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PDE6BP35913 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC18.22■□□□□ 0.51
PDE6BP35913 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms