Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.9□□□□□ -0.34
TNFSF4P23510 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.9□□□□□ -0.34
TNFSF4P23510 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.9□□□□□ -0.34
TNFSF4P23510 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.9□□□□□ -0.34
TNFSF4P23510 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TNFSF4P23510 RPSAP52-203ENST00000622976 1023 ntBASIC12.9□□□□□ -0.34
TNFSF4P23510 AC132938.4-201ENST00000623835 848 ntBASIC12.9□□□□□ -0.34
TNFSF4P23510 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TNFSF4P23510 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.9□□□□□ -0.34
TNFSF4P23510 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.9□□□□□ -0.34
TNFSF4P23510 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 FAM45BP-202ENST00000592932 1624 ntBASIC12.9□□□□□ -0.34
TNFSF4P23510 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TNFSF4P23510 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.9□□□□□ -0.34
TNFSF4P23510 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.9□□□□□ -0.34
TNFSF4P23510 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 LILRP1-201ENST00000444199 1370 ntBASIC12.9□□□□□ -0.34
TNFSF4P23510 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TNFSF4P23510 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TNFSF4P23510 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
TNFSF4P23510 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TNFSF4P23510 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.9□□□□□ -0.35
TNFSF4P23510 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TNFSF4P23510 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.9□□□□□ -0.35
TNFSF4P23510 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.35
TNFSF4P23510 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
TNFSF4P23510 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.9□□□□□ -0.35
TNFSF4P23510 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.89□□□□□ -0.35
TNFSF4P23510 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.89□□□□□ -0.35
TNFSF4P23510 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.89□□□□□ -0.35
TNFSF4P23510 AC055811.4-201ENST00000624039 1754 ntBASIC12.89□□□□□ -0.35
TNFSF4P23510 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TNFSF4P23510 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC12.89□□□□□ -0.35
TNFSF4P23510 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TNFSF4P23510 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
TNFSF4P23510 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TNFSF4P23510 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.89□□□□□ -0.35
TNFSF4P23510 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
TNFSF4P23510 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TNFSF4P23510 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.89□□□□□ -0.35
TNFSF4P23510 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.89□□□□□ -0.35
TNFSF4P23510 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 KLF2P4-201ENST00000451959 1225 ntBASIC12.89□□□□□ -0.35
TNFSF4P23510 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.89□□□□□ -0.35
TNFSF4P23510 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.89□□□□□ -0.35
TNFSF4P23510 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TNFSF4P23510 AC079316.1-201ENST00000548397 411 ntBASIC12.89□□□□□ -0.35
TNFSF4P23510 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.89□□□□□ -0.35
TNFSF4P23510 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.89□□□□□ -0.35
TNFSF4P23510 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.89□□□□□ -0.35
TNFSF4P23510 AC017083.2-201ENST00000608069 979 ntBASIC12.89□□□□□ -0.35
TNFSF4P23510 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.89□□□□□ -0.35
TNFSF4P23510 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
TNFSF4P23510 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.89□□□□□ -0.35
TNFSF4P23510 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.89□□□□□ -0.35
TNFSF4P23510 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.89□□□□□ -0.35
TNFSF4P23510 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.89□□□□□ -0.35
TNFSF4P23510 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
TNFSF4P23510 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.89□□□□□ -0.35
TNFSF4P23510 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
TNFSF4P23510 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TNFSF4P23510 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TNFSF4P23510 AL031595.1-201ENST00000623969 4709 ntBASIC12.88□□□□□ -0.35
TNFSF4P23510 AC006486.2-201ENST00000624246 2199 ntBASIC12.88□□□□□ -0.35
TNFSF4P23510 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TNFSF4P23510 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.88□□□□□ -0.35
TNFSF4P23510 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms