Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
PCDHA4Q9UN74 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 AC140479.7-201ENST00000636301 2332 ntBASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 OR8S1-201ENST00000310194 1080 ntBASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 WBP2-203ENST00000433525 928 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 C2orf69P2-201ENST00000562032 1123 ntBASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHA4Q9UN74 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 AL354702.1-201ENST00000442006 1960 ntBASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 IGHV3-71-201ENST00000523324 359 ntBASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 AC017083.2-201ENST00000608069 979 ntBASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 AC099063.4-201ENST00000641099 1602 ntBASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 AC113367.3-201ENST00000508316 1912 ntBASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHA4Q9UN74 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHA4Q9UN74 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHA4Q9UN74 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
PCDHA4Q9UN74 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHA4Q9UN74 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHA4Q9UN74 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms