Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HACD3Q9P035 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.26■□□□□ 0.03
HACD3Q9P035 CU639417.3-201ENST00000624240 1404 ntBASIC15.26■□□□□ 0.03
HACD3Q9P035 CICP4-201ENST00000447359 2812 ntBASIC15.25■□□□□ 0.03
HACD3Q9P035 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.25■□□□□ 0.03
HACD3Q9P035 AL157414.3-201ENST00000624276 1954 ntBASIC15.25■□□□□ 0.03
HACD3Q9P035 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
HACD3Q9P035 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.25■□□□□ 0.03
HACD3Q9P035 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HACD3Q9P035 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.25■□□□□ 0.03
HACD3Q9P035 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.25■□□□□ 0.03
HACD3Q9P035 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
HACD3Q9P035 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HACD3Q9P035 AL359258.3-201ENST00000622910 2331 ntBASIC15.25■□□□□ 0.03
HACD3Q9P035 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HACD3Q9P035 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HACD3Q9P035 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HACD3Q9P035 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HACD3Q9P035 GIMAP3P-201ENST00000495150 836 ntBASIC15.25■□□□□ 0.03
HACD3Q9P035 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.25■□□□□ 0.03
HACD3Q9P035 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.25■□□□□ 0.03
HACD3Q9P035 AL596325.1-201ENST00000563991 1082 ntBASIC15.25■□□□□ 0.03
HACD3Q9P035 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.25■□□□□ 0.03
HACD3Q9P035 AC010319.3-201ENST00000597028 470 ntBASIC15.25■□□□□ 0.03
HACD3Q9P035 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.25■□□□□ 0.03
HACD3Q9P035 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HACD3Q9P035 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 LRRC59-203ENST00000576448 1531 ntBASIC15.25■□□□□ 0.03
HACD3Q9P035 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.25■□□□□ 0.03
HACD3Q9P035 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.25■□□□□ 0.03
HACD3Q9P035 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.25■□□□□ 0.03
HACD3Q9P035 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
HACD3Q9P035 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HACD3Q9P035 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.25■□□□□ 0.03
HACD3Q9P035 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HACD3Q9P035 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.24■□□□□ 0.03
HACD3Q9P035 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HACD3Q9P035 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.24■□□□□ 0.03
HACD3Q9P035 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
HACD3Q9P035 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HACD3Q9P035 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
HACD3Q9P035 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HACD3Q9P035 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HACD3Q9P035 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.24■□□□□ 0.03
HACD3Q9P035 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.24■□□□□ 0.03
HACD3Q9P035 KRT8P35-201ENST00000483942 1338 ntBASIC15.24■□□□□ 0.03
HACD3Q9P035 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HACD3Q9P035 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.24■□□□□ 0.03
HACD3Q9P035 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HACD3Q9P035 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HACD3Q9P035 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
HACD3Q9P035 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.24■□□□□ 0.03
HACD3Q9P035 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HACD3Q9P035 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HACD3Q9P035 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
HACD3Q9P035 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HACD3Q9P035 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
HACD3Q9P035 BAATP1-201ENST00000412284 1225 ntBASIC15.24■□□□□ 0.03
HACD3Q9P035 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.24■□□□□ 0.03
HACD3Q9P035 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.24■□□□□ 0.03
HACD3Q9P035 AC012441.1-201ENST00000446669 685 ntBASIC15.24■□□□□ 0.03
HACD3Q9P035 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HACD3Q9P035 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HACD3Q9P035 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
HACD3Q9P035 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.24■□□□□ 0.03
HACD3Q9P035 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.24■□□□□ 0.03
HACD3Q9P035 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.24■□□□□ 0.03
HACD3Q9P035 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.24■□□□□ 0.03
HACD3Q9P035 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.24■□□□□ 0.03
HACD3Q9P035 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HACD3Q9P035 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
HACD3Q9P035 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HACD3Q9P035 AC015936.2-201ENST00000593177 259 ntBASIC15.24■□□□□ 0.03
HACD3Q9P035 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.24■□□□□ 0.03
HACD3Q9P035 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.24■□□□□ 0.03
HACD3Q9P035 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms