Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC155Q8N6L0 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 AC148477.4-201ENST00000613430 1793 ntBASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 ACTBP8-201ENST00000403258 1108 ntBASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 SLC25A24P2-201ENST00000415059 510 ntBASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 AC114812.1-204ENST00000449669 728 ntBASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 HOMER2P2-201ENST00000451621 847 ntBASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 AL591846.1-201ENST00000451736 433 ntBASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 NAT9-222ENST00000583476 583 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 AC007292.2-201ENST00000593524 1812 ntBASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC155Q8N6L0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 PCDHA3-202ENST00000532566 4594 ntBASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 AC092506.1-202ENST00000401022 528 ntBASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 AC126365.1-201ENST00000578585 1514 ntBASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC155Q8N6L0 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC155Q8N6L0 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC155Q8N6L0 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC155Q8N6L0 OR2I1P-209ENST00000641730 5365 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms