Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.17□□□□□ -0.14
SMSP52788 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.17□□□□□ -0.14
SMSP52788 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.17□□□□□ -0.14
SMSP52788 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SMSP52788 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.17□□□□□ -0.14
SMSP52788 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
SMSP52788 ACE3P-201ENST00000423435 1973 ntBASIC14.17□□□□□ -0.14
SMSP52788 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
SMSP52788 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SMSP52788 BRWD1P1-201ENST00000401091 371 ntBASIC14.17□□□□□ -0.14
SMSP52788 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.17□□□□□ -0.14
SMSP52788 AL442647.2-201ENST00000429864 857 ntBASIC14.17□□□□□ -0.14
SMSP52788 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 ACTBP11-201ENST00000436287 1126 ntBASIC14.17□□□□□ -0.14
SMSP52788 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.17□□□□□ -0.14
SMSP52788 BNIP3P42-201ENST00000454982 569 ntBASIC14.17□□□□□ -0.14
SMSP52788 SLC25A47P1-201ENST00000531577 414 ntBASIC14.17□□□□□ -0.14
SMSP52788 SNX29P1-201ENST00000548357 1007 ntBASIC14.17□□□□□ -0.14
SMSP52788 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.17□□□□□ -0.14
SMSP52788 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.17□□□□□ -0.14
SMSP52788 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.17□□□□□ -0.14
SMSP52788 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.17□□□□□ -0.14
SMSP52788 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.17□□□□□ -0.14
SMSP52788 BNIP3P29-201ENST00000598302 571 ntBASIC14.17□□□□□ -0.14
SMSP52788 AC011447.5-201ENST00000616168 564 ntBASIC14.17□□□□□ -0.14
SMSP52788 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.17□□□□□ -0.14
SMSP52788 CU634019.7-201ENST00000624153 1185 ntBASIC14.17□□□□□ -0.14
SMSP52788 FP236241.2-201ENST00000624906 1185 ntBASIC14.17□□□□□ -0.14
SMSP52788 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.17□□□□□ -0.14
SMSP52788 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SMSP52788 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.17□□□□□ -0.14
SMSP52788 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.17□□□□□ -0.14
SMSP52788 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.17□□□□□ -0.14
SMSP52788 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.17□□□□□ -0.14
SMSP52788 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.17□□□□□ -0.14
SMSP52788 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
SMSP52788 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SMSP52788 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SMSP52788 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMSP52788 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.16□□□□□ -0.14
SMSP52788 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.16□□□□□ -0.14
SMSP52788 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.16□□□□□ -0.14
SMSP52788 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SMSP52788 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMSP52788 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.16□□□□□ -0.14
SMSP52788 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMSP52788 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMSP52788 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMSP52788 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.16□□□□□ -0.14
SMSP52788 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMSP52788 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.16□□□□□ -0.14
SMSP52788 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMSP52788 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMSP52788 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SMSP52788 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMSP52788 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.16□□□□□ -0.14
SMSP52788 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SMSP52788 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.16□□□□□ -0.14
SMSP52788 CTBP2P5-201ENST00000454986 1264 ntBASIC14.16□□□□□ -0.14
SMSP52788 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.16□□□□□ -0.14
SMSP52788 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SMSP52788 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.16□□□□□ -0.14
SMSP52788 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SMSP52788 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.16□□□□□ -0.14
SMSP52788 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
SMSP52788 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMSP52788 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMSP52788 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SMSP52788 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMSP52788 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.16□□□□□ -0.14
SMSP52788 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SMSP52788 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMSP52788 CICP11-201ENST00000434745 2827 ntBASIC14.16□□□□□ -0.14
SMSP52788 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SMSP52788 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMSP52788 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SMSP52788 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SMSP52788 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SMSP52788 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SMSP52788 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms