Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
HMGCLP35914 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.93□□□□□ -0.02
HMGCLP35914 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HMGCLP35914 AHCYP2-201ENST00000430630 1300 ntBASIC14.92□□□□□ -0.02
HMGCLP35914 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.92□□□□□ -0.02
HMGCLP35914 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGCLP35914 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.92□□□□□ -0.02
HMGCLP35914 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HMGCLP35914 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
HMGCLP35914 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGCLP35914 ANKRD19P-201ENST00000338192 862 ntBASIC14.92□□□□□ -0.02
HMGCLP35914 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGCLP35914 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HMGCLP35914 GCOM2-201ENST00000509133 1104 ntBASIC14.92□□□□□ -0.02
HMGCLP35914 AC104989.1-201ENST00000519711 778 ntBASIC14.92□□□□□ -0.02
HMGCLP35914 AP003171.2-201ENST00000528208 925 ntBASIC14.92□□□□□ -0.02
HMGCLP35914 HILS1-202ENST00000545329 423 ntBASIC14.92□□□□□ -0.02
HMGCLP35914 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGCLP35914 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.92□□□□□ -0.02
HMGCLP35914 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.92□□□□□ -0.02
HMGCLP35914 OR10B1P-201ENST00000601666 907 ntBASIC14.92□□□□□ -0.02
HMGCLP35914 BX088702.1-201ENST00000610784 235 ntBASIC14.92□□□□□ -0.02
HMGCLP35914 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.92□□□□□ -0.02
HMGCLP35914 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.92□□□□□ -0.02
HMGCLP35914 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGCLP35914 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.92□□□□□ -0.02
HMGCLP35914 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.92□□□□□ -0.02
HMGCLP35914 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGCLP35914 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
HMGCLP35914 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.92□□□□□ -0.02
HMGCLP35914 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HMGCLP35914 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HMGCLP35914 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HMGCLP35914 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCLP35914 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
HMGCLP35914 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCLP35914 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCLP35914 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGCLP35914 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCLP35914 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGCLP35914 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCLP35914 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.91□□□□□ -0.02
HMGCLP35914 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
HMGCLP35914 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HMGCLP35914 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HMGCLP35914 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCLP35914 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HMGCLP35914 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCLP35914 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCLP35914 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGCLP35914 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCLP35914 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.91□□□□□ -0.02
HMGCLP35914 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCLP35914 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HMGCLP35914 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.91□□□□□ -0.02
HMGCLP35914 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.91□□□□□ -0.02
HMGCLP35914 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGCLP35914 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.91□□□□□ -0.02
HMGCLP35914 AP005482.1-201ENST00000563722 1273 ntBASIC14.91□□□□□ -0.02
HMGCLP35914 RN7SL713P-201ENST00000582127 302 ntBASIC14.91□□□□□ -0.02
HMGCLP35914 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGCLP35914 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.91□□□□□ -0.02
HMGCLP35914 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.91□□□□□ -0.02
HMGCLP35914 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
HMGCLP35914 MIR6775-201ENST00000617557 69 ntBASIC14.91□□□□□ -0.02
HMGCLP35914 AC008687.7-202ENST00000637404 953 ntBASIC14.91□□□□□ -0.02
HMGCLP35914 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCLP35914 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCLP35914 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
HMGCLP35914 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.91□□□□□ -0.02
HMGCLP35914 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCLP35914 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCLP35914 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HMGCLP35914 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms