Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
HMGN1P05114 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.68□□□□□ -0.22
HMGN1P05114 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HMGN1P05114 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HMGN1P05114 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.68□□□□□ -0.22
HMGN1P05114 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.68□□□□□ -0.22
HMGN1P05114 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.68□□□□□ -0.22
HMGN1P05114 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
HMGN1P05114 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.68□□□□□ -0.22
HMGN1P05114 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.68□□□□□ -0.22
HMGN1P05114 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
HMGN1P05114 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.68□□□□□ -0.22
HMGN1P05114 AC010336.2-201ENST00000564226 506 ntBASIC13.68□□□□□ -0.22
HMGN1P05114 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.68□□□□□ -0.22
HMGN1P05114 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.68□□□□□ -0.22
HMGN1P05114 TEX28P1-201ENST00000613479 1221 ntBASIC13.68□□□□□ -0.22
HMGN1P05114 TEX28P2-201ENST00000617764 1221 ntBASIC13.68□□□□□ -0.22
HMGN1P05114 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
HMGN1P05114 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.68□□□□□ -0.22
HMGN1P05114 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
HMGN1P05114 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
HMGN1P05114 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.68□□□□□ -0.22
HMGN1P05114 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.68□□□□□ -0.22
HMGN1P05114 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HMGN1P05114 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGN1P05114 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.67□□□□□ -0.22
HMGN1P05114 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
HMGN1P05114 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HMGN1P05114 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.67□□□□□ -0.22
HMGN1P05114 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HMGN1P05114 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.67□□□□□ -0.22
HMGN1P05114 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGN1P05114 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HMGN1P05114 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HMGN1P05114 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.67□□□□□ -0.22
HMGN1P05114 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGN1P05114 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.67□□□□□ -0.22
HMGN1P05114 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HMGN1P05114 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.67□□□□□ -0.22
HMGN1P05114 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.67□□□□□ -0.22
HMGN1P05114 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGN1P05114 AL645937.2-201ENST00000396808 931 ntBASIC13.67□□□□□ -0.22
HMGN1P05114 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.67□□□□□ -0.22
HMGN1P05114 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.67□□□□□ -0.22
HMGN1P05114 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.67□□□□□ -0.22
HMGN1P05114 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGN1P05114 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.67□□□□□ -0.22
HMGN1P05114 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.67□□□□□ -0.22
HMGN1P05114 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.67□□□□□ -0.22
HMGN1P05114 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGN1P05114 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.67□□□□□ -0.22
HMGN1P05114 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.67□□□□□ -0.22
HMGN1P05114 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HMGN1P05114 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HMGN1P05114 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGN1P05114 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HMGN1P05114 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.67□□□□□ -0.22
HMGN1P05114 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
HMGN1P05114 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGN1P05114 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.67□□□□□ -0.22
HMGN1P05114 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HMGN1P05114 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HMGN1P05114 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HMGN1P05114 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.66□□□□□ -0.22
HMGN1P05114 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HMGN1P05114 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HMGN1P05114 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
HMGN1P05114 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HMGN1P05114 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
HMGN1P05114 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms