Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 CSH2-202ENST00000345366 598 ntTSL 5 BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 AL161932.2-201ENST00000435436 679 ntBASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 AC003686.1-201ENST00000550956 1034 ntBASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 CSH2-206ENST00000560142 749 ntTSL 5 BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 AC005962.1-201ENST00000584100 773 ntBASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 MBLAC2-202ENST00000514906 1936 ntBASIC19.91■□□□□ 0.78
NPC1L1Q9UHC9 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 AC144522.1-201ENST00000625111 1658 ntBASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 AC004899.1-201ENST00000424687 1714 ntBASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 NPPA-201ENST00000376476 728 ntTSL 3 BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 AC133540.1-201ENST00000620845 1019 ntBASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 FAS-202ENST00000352159 1722 ntTSL 5 BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 OR6D1P-203ENST00000641209 4860 ntBASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC19.9■□□□□ 0.78
NPC1L1Q9UHC9 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
NPC1L1Q9UHC9 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
NPC1L1Q9UHC9 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC19.89■□□□□ 0.78
NPC1L1Q9UHC9 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
NPC1L1Q9UHC9 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
NPC1L1Q9UHC9 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
NPC1L1Q9UHC9 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NPC1L1Q9UHC9 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC19.89■□□□□ 0.78
NPC1L1Q9UHC9 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NPC1L1Q9UHC9 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
NPC1L1Q9UHC9 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 RPL18P13-201ENST00000478088 569 ntBASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 MARK2P5-201ENST00000507649 634 ntBASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 RBM8B-201ENST00000555532 525 ntBASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 AC013355.1-201ENST00000562625 723 ntBASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 BX640514.1-201ENST00000583223 1918 ntBASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 MYB-242ENST00000618728 3545 ntTSL 5 BASIC19.89■□□□□ 0.77
NPC1L1Q9UHC9 RER1-203ENST00000378513 3000 ntTSL 3 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms