Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM4Q86VH4 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM4Q86VH4 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM4Q86VH4 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LRRTM4Q86VH4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM4Q86VH4 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LRRTM4Q86VH4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM4Q86VH4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.75□□□□□ -0.05
LRRTM4Q86VH4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.75□□□□□ -0.05
LRRTM4Q86VH4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM4Q86VH4 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.75□□□□□ -0.05
LRRTM4Q86VH4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM4Q86VH4 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.75□□□□□ -0.05
LRRTM4Q86VH4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LRRTM4Q86VH4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
LRRTM4Q86VH4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.75□□□□□ -0.05
LRRTM4Q86VH4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 AL138725.1-201ENST00000407347 1314 ntBASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 TUBB1P2-201ENST00000422712 1306 ntBASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 TUBB1P1-201ENST00000503144 1300 ntBASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 AL355994.2-201ENST00000447882 704 ntBASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 RN7SL560P-201ENST00000577943 264 ntBASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 PPY2P-201ENST00000582808 702 ntBASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 AC011840.2-201ENST00000563063 1520 ntBASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 AC003102.2-201ENST00000589195 1469 ntBASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LRRTM4Q86VH4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 SALL4P5-201ENST00000419001 1760 ntBASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 LINC00528-201ENST00000600723 2160 ntBASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 AL136309.1-201ENST00000403917 691 ntBASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 RN7SKP175-201ENST00000408472 289 ntBASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 AC004945.1-201ENST00000416738 983 ntBASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 MIR4741-201ENST00000579822 90 ntBASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 KRT8P4-201ENST00000509735 1454 ntBASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LRRTM4Q86VH4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms