Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 Z69890.1-201ENST00000382990 339 ntBASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 RN7SL564P-201ENST00000496309 250 ntBASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC22.03■■□□□ 1.12
CDC42BPAQ5VT25 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 AC234644.1-201ENST00000406065 370 ntBASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 AC006158.1-201ENST00000610661 249 ntBASIC22.02■■□□□ 1.12
CDC42BPAQ5VT25 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.11
CDC42BPAQ5VT25 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.11
CDC42BPAQ5VT25 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CDC42BPAQ5VT25 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 AL161932.2-201ENST00000435436 679 ntBASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
CDC42BPAQ5VT25 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 AC098934.1-203ENST00000442868 1262 ntBASIC22■■□□□ 1.11
CDC42BPAQ5VT25 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 NSD1-211ENST00000511258 809 ntTSL 3 BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 HERC2P11-201ENST00000562845 725 ntBASIC22■■□□□ 1.11
CDC42BPAQ5VT25 AC100756.2-201ENST00000569537 736 ntBASIC22■■□□□ 1.11
CDC42BPAQ5VT25 MIR4472-1-201ENST00000584349 80 ntBASIC22■■□□□ 1.11
CDC42BPAQ5VT25 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 AC244250.3-201ENST00000620749 366 ntBASIC22■■□□□ 1.11
CDC42BPAQ5VT25 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPAQ5VT25 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms