Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 AC135586.1-201ENST00000539323 574 ntBASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 TIMM17BP1-201ENST00000545713 516 ntBASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 SPCS2P1-201ENST00000561636 679 ntBASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 AC011467.4-201ENST00000594891 528 ntBASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 AC004840.1-201ENST00000636359 365 ntBASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 AC092135.3-201ENST00000624151 1846 ntBASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 AC138969.3-201ENST00000546612 1459 ntBASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 AC138932.2-201ENST00000548268 1459 ntBASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 AC126755.4-201ENST00000549796 1459 ntBASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ATPAF1Q5TC12 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.15□□□□□ -0.31
ATPAF1Q5TC12 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.31
ATPAF1Q5TC12 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
ATPAF1Q5TC12 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.15□□□□□ -0.31
ATPAF1Q5TC12 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 REXO1L2P-201ENST00000425429 2069 ntBASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 SRD5A3P1-201ENST00000603021 949 ntBASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ATPAF1Q5TC12 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.13□□□□□ -0.31
ATPAF1Q5TC12 FAM207CP-201ENST00000443486 507 ntBASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms