Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SRP54P61011 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.88□□□□□ -0.03
SRP54P61011 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.88□□□□□ -0.03
SRP54P61011 AC007969.1-201ENST00000433675 447 ntBASIC14.88□□□□□ -0.03
SRP54P61011 AL591846.1-201ENST00000451736 433 ntBASIC14.88□□□□□ -0.03
SRP54P61011 RPSAP36-202ENST00000494591 1261 ntBASIC14.88□□□□□ -0.03
SRP54P61011 AC026434.2-201ENST00000506094 1078 ntBASIC14.88□□□□□ -0.03
SRP54P61011 AL391280.1-201ENST00000506969 1062 ntBASIC14.88□□□□□ -0.03
SRP54P61011 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.88□□□□□ -0.03
SRP54P61011 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.88□□□□□ -0.03
SRP54P61011 RN7SL713P-201ENST00000582127 302 ntBASIC14.88□□□□□ -0.03
SRP54P61011 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.88□□□□□ -0.03
SRP54P61011 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SRP54P61011 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 AC004466.1-201ENST00000599515 1080 ntBASIC14.88□□□□□ -0.03
SRP54P61011 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.88□□□□□ -0.03
SRP54P61011 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SRP54P61011 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SRP54P61011 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.88□□□□□ -0.03
SRP54P61011 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
SRP54P61011 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.88□□□□□ -0.03
SRP54P61011 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SRP54P61011 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SRP54P61011 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SRP54P61011 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP54P61011 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.87□□□□□ -0.03
SRP54P61011 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
SRP54P61011 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SRP54P61011 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.87□□□□□ -0.03
SRP54P61011 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.87□□□□□ -0.03
SRP54P61011 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP54P61011 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP54P61011 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SRP54P61011 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
SRP54P61011 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SRP54P61011 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.87□□□□□ -0.03
SRP54P61011 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP54P61011 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.87□□□□□ -0.03
SRP54P61011 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SRP54P61011 AL137783.1-201ENST00000623494 1896 ntBASIC14.87□□□□□ -0.03
SRP54P61011 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP54P61011 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SRP54P61011 OR2I1P-209ENST00000641730 5365 ntBASIC14.87□□□□□ -0.03
SRP54P61011 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.87□□□□□ -0.03
SRP54P61011 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SRP54P61011 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.87□□□□□ -0.03
SRP54P61011 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.87□□□□□ -0.03
SRP54P61011 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.87□□□□□ -0.03
SRP54P61011 AC104306.2-201ENST00000451877 341 ntBASIC14.87□□□□□ -0.03
SRP54P61011 FTLP10-202ENST00000505798 471 ntBASIC14.87□□□□□ -0.03
SRP54P61011 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.87□□□□□ -0.03
SRP54P61011 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
SRP54P61011 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.87□□□□□ -0.03
SRP54P61011 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.87□□□□□ -0.03
SRP54P61011 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.87□□□□□ -0.03
SRP54P61011 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.87□□□□□ -0.03
SRP54P61011 PPY2P-201ENST00000582808 702 ntBASIC14.87□□□□□ -0.03
SRP54P61011 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SRP54P61011 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.87□□□□□ -0.03
SRP54P61011 AC244093.1-201ENST00000610837 814 ntBASIC14.87□□□□□ -0.03
SRP54P61011 AC138466.3-201ENST00000619983 221 ntBASIC14.87□□□□□ -0.03
SRP54P61011 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP54P61011 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.87□□□□□ -0.03
SRP54P61011 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
SRP54P61011 FAM45BP-202ENST00000592932 1624 ntBASIC14.87□□□□□ -0.03
SRP54P61011 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
SRP54P61011 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP54P61011 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.87□□□□□ -0.03
SRP54P61011 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP54P61011 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP54P61011 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SRP54P61011 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SRP54P61011 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.87□□□□□ -0.03
SRP54P61011 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
SRP54P61011 CLUHP2-201ENST00000426660 1303 ntBASIC14.87□□□□□ -0.03
SRP54P61011 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.87□□□□□ -0.03
SRP54P61011 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
SRP54P61011 AL359258.3-201ENST00000622910 2331 ntBASIC14.87□□□□□ -0.03
SRP54P61011 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.87□□□□□ -0.03
SRP54P61011 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP54P61011 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP54P61011 AL023775.1-201ENST00000454907 1746 ntBASIC14.86□□□□□ -0.03
SRP54P61011 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP54P61011 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
SRP54P61011 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SRP54P61011 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms