Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC18.65■□□□□ 0.58
RFC4P35249 AC105137.3-201ENST00000617588 984 ntBASIC18.65■□□□□ 0.58
RFC4P35249 AC009560.1-201ENST00000620208 434 ntBASIC18.65■□□□□ 0.58
RFC4P35249 AC005618.3-201ENST00000624928 458 ntBASIC18.65■□□□□ 0.58
RFC4P35249 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC18.65■□□□□ 0.58
RFC4P35249 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC18.65■□□□□ 0.58
RFC4P35249 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFC4P35249 FAS-202ENST00000352159 1722 ntTSL 5 BASIC18.65■□□□□ 0.58
RFC4P35249 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RFC4P35249 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFC4P35249 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RFC4P35249 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RFC4P35249 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RFC4P35249 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RFC4P35249 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RFC4P35249 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
RFC4P35249 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
RFC4P35249 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RFC4P35249 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RFC4P35249 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC4P35249 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFC4P35249 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC4P35249 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC4P35249 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC4P35249 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC4P35249 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC18.64■□□□□ 0.57
RFC4P35249 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC4P35249 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RFC4P35249 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
RFC4P35249 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC4P35249 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RFC4P35249 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFC4P35249 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFC4P35249 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC18.64■□□□□ 0.57
RFC4P35249 LYPLA2P1-203ENST00000447689 696 ntBASIC18.64■□□□□ 0.57
RFC4P35249 FTH1P22-201ENST00000456305 520 ntBASIC18.64■□□□□ 0.57
RFC4P35249 AC114947.1-202ENST00000514136 344 ntBASIC18.64■□□□□ 0.57
RFC4P35249 POLD4-208ENST00000532830 904 ntTSL 3 BASIC18.64■□□□□ 0.57
RFC4P35249 AC131206.1-201ENST00000538078 1211 ntBASIC18.64■□□□□ 0.57
RFC4P35249 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC18.64■□□□□ 0.57
RFC4P35249 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC4P35249 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFC4P35249 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC4P35249 AC084781.1-201ENST00000613737 656 ntBASIC18.64■□□□□ 0.57
RFC4P35249 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RFC4P35249 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
RFC4P35249 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC4P35249 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RFC4P35249 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC18.64■□□□□ 0.57
RFC4P35249 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFC4P35249 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.64■□□□□ 0.57
RFC4P35249 AC084018.2-201ENST00000613093 2607 ntBASIC18.64■□□□□ 0.57
RFC4P35249 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RFC4P35249 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RFC4P35249 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFC4P35249 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.64■□□□□ 0.57
RFC4P35249 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.64■□□□□ 0.57
RFC4P35249 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFC4P35249 PCDHB19P-201ENST00000570871 2371 ntBASIC18.63■□□□□ 0.57
RFC4P35249 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFC4P35249 AC092850.2-201ENST00000623821 2697 ntBASIC18.63■□□□□ 0.57
RFC4P35249 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC4P35249 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RFC4P35249 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC4P35249 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFC4P35249 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC4P35249 KRT18P36-201ENST00000411618 1276 ntBASIC18.63■□□□□ 0.57
RFC4P35249 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC18.63■□□□□ 0.57
RFC4P35249 MRPL22P1-201ENST00000505398 616 ntBASIC18.63■□□□□ 0.57
RFC4P35249 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RFC4P35249 TMCO5B-205ENST00000530020 894 ntBASIC18.63■□□□□ 0.57
RFC4P35249 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFC4P35249 NUDT4P2-201ENST00000578341 546 ntBASIC18.63■□□□□ 0.57
RFC4P35249 MIR3180-2-201ENST00000581748 88 ntBASIC18.63■□□□□ 0.57
RFC4P35249 AP001184.1-201ENST00000637936 376 ntBASIC18.63■□□□□ 0.57
RFC4P35249 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC4P35249 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.63■□□□□ 0.57
RFC4P35249 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.63■□□□□ 0.57
RFC4P35249 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.63■□□□□ 0.57
RFC4P35249 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFC4P35249 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC4P35249 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFC4P35249 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC4P35249 TMBIM7P-202ENST00000641474 1516 ntBASIC18.63■□□□□ 0.57
RFC4P35249 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.63■□□□□ 0.57
RFC4P35249 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RFC4P35249 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFC4P35249 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RFC4P35249 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.62■□□□□ 0.57
RFC4P35249 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC4P35249 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFC4P35249 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC4P35249 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFC4P35249 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.62■□□□□ 0.57
RFC4P35249 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RFC4P35249 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC4P35249 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC4P35249 AC013726.1-201ENST00000563747 2285 ntBASIC18.62■□□□□ 0.57
RFC4P35249 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFC4P35249 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms