Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.62□□□□□ -0.07
TNFP01375 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFP01375 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.62□□□□□ -0.07
TNFP01375 SLC25A24P2-201ENST00000415059 510 ntBASIC14.62□□□□□ -0.07
TNFP01375 FAM58BP-201ENST00000439056 645 ntBASIC14.62□□□□□ -0.07
TNFP01375 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFP01375 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFP01375 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.62□□□□□ -0.07
TNFP01375 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFP01375 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFP01375 NDUFV2P1-201ENST00000596415 907 ntBASIC14.62□□□□□ -0.07
TNFP01375 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.62□□□□□ -0.07
TNFP01375 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFP01375 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFP01375 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.62□□□□□ -0.07
TNFP01375 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.62□□□□□ -0.07
TNFP01375 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
TNFP01375 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFP01375 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
TNFP01375 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.62□□□□□ -0.07
TNFP01375 AC006058.4-201ENST00000624016 1670 ntBASIC14.61□□□□□ -0.07
TNFP01375 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
TNFP01375 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.61□□□□□ -0.07
TNFP01375 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.61□□□□□ -0.07
TNFP01375 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TNFP01375 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TNFP01375 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 E2F3P2-201ENST00000447755 1422 ntBASIC14.61□□□□□ -0.07
TNFP01375 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.61□□□□□ -0.07
TNFP01375 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TNFP01375 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TNFP01375 AL008707.1-201ENST00000422498 534 ntBASIC14.61□□□□□ -0.07
TNFP01375 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.61□□□□□ -0.07
TNFP01375 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.61□□□□□ -0.07
TNFP01375 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.61□□□□□ -0.07
TNFP01375 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.61□□□□□ -0.07
TNFP01375 ACTG1P17-201ENST00000558391 1119 ntBASIC14.61□□□□□ -0.07
TNFP01375 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.61□□□□□ -0.07
TNFP01375 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.61□□□□□ -0.07
TNFP01375 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.61□□□□□ -0.07
TNFP01375 AC009955.4-201ENST00000597192 544 ntBASIC14.61□□□□□ -0.07
TNFP01375 BNIP3P13-201ENST00000599968 566 ntBASIC14.61□□□□□ -0.07
TNFP01375 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.61□□□□□ -0.07
TNFP01375 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.61□□□□□ -0.07
TNFP01375 AL136295.7-201ENST00000619226 1200 ntBASIC14.61□□□□□ -0.07
TNFP01375 AC022748.3-201ENST00000621828 275 ntBASIC14.61□□□□□ -0.07
TNFP01375 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.61□□□□□ -0.07
TNFP01375 AC004923.1-202ENST00000642106 209 ntBASIC14.61□□□□□ -0.07
TNFP01375 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.61□□□□□ -0.07
TNFP01375 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.61□□□□□ -0.07
TNFP01375 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.61□□□□□ -0.07
TNFP01375 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.61□□□□□ -0.07
TNFP01375 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFP01375 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms