Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.71□□□□□ -0.05
E2F3O00716 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.71□□□□□ -0.05
E2F3O00716 KRT8P14-201ENST00000414254 1442 ntBASIC14.71□□□□□ -0.05
E2F3O00716 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
E2F3O00716 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
E2F3O00716 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
E2F3O00716 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
E2F3O00716 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.71□□□□□ -0.05
E2F3O00716 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
E2F3O00716 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
E2F3O00716 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
E2F3O00716 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
E2F3O00716 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
E2F3O00716 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.06
E2F3O00716 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
E2F3O00716 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.7□□□□□ -0.06
E2F3O00716 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.7□□□□□ -0.06
E2F3O00716 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.7□□□□□ -0.06
E2F3O00716 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.7□□□□□ -0.06
E2F3O00716 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
E2F3O00716 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.7□□□□□ -0.06
E2F3O00716 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
E2F3O00716 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.7□□□□□ -0.06
E2F3O00716 AC112492.5-201ENST00000421897 457 ntBASIC14.7□□□□□ -0.06
E2F3O00716 AC134915.1-201ENST00000426461 574 ntBASIC14.7□□□□□ -0.06
E2F3O00716 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.7□□□□□ -0.06
E2F3O00716 AL442647.2-201ENST00000429864 857 ntBASIC14.7□□□□□ -0.06
E2F3O00716 AC011495.1-201ENST00000498085 584 ntBASIC14.7□□□□□ -0.06
E2F3O00716 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.7□□□□□ -0.06
E2F3O00716 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.7□□□□□ -0.06
E2F3O00716 DUX4L47-201ENST00000566374 394 ntBASIC14.7□□□□□ -0.06
E2F3O00716 AC106886.1-201ENST00000568660 600 ntBASIC14.7□□□□□ -0.06
E2F3O00716 AC124283.3-201ENST00000570869 594 ntBASIC14.7□□□□□ -0.06
E2F3O00716 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.7□□□□□ -0.06
E2F3O00716 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
E2F3O00716 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.7□□□□□ -0.06
E2F3O00716 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.7□□□□□ -0.06
E2F3O00716 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.7□□□□□ -0.06
E2F3O00716 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.7□□□□□ -0.06
E2F3O00716 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.7□□□□□ -0.06
E2F3O00716 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
E2F3O00716 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.7□□□□□ -0.06
E2F3O00716 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
E2F3O00716 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
E2F3O00716 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
E2F3O00716 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
E2F3O00716 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
E2F3O00716 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
E2F3O00716 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
E2F3O00716 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.69□□□□□ -0.06
E2F3O00716 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
E2F3O00716 KRT8P22-201ENST00000562317 1415 ntBASIC14.69□□□□□ -0.06
E2F3O00716 AC015802.1-201ENST00000588104 1449 ntBASIC14.69□□□□□ -0.06
E2F3O00716 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
E2F3O00716 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
E2F3O00716 AC015656.1-201ENST00000624209 3578 ntBASIC14.69□□□□□ -0.06
E2F3O00716 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
E2F3O00716 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
E2F3O00716 C1QBPP1-201ENST00000400117 770 ntBASIC14.69□□□□□ -0.06
E2F3O00716 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.69□□□□□ -0.06
E2F3O00716 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.69□□□□□ -0.06
E2F3O00716 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.69□□□□□ -0.06
E2F3O00716 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.69□□□□□ -0.06
E2F3O00716 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.69□□□□□ -0.06
E2F3O00716 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.69□□□□□ -0.06
E2F3O00716 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.69□□□□□ -0.06
E2F3O00716 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.69□□□□□ -0.06
E2F3O00716 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.69□□□□□ -0.06
E2F3O00716 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.69□□□□□ -0.06
E2F3O00716 AC093726.1-201ENST00000608064 963 ntBASIC14.69□□□□□ -0.06
E2F3O00716 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.69□□□□□ -0.06
E2F3O00716 MIR6805-201ENST00000615055 62 ntBASIC14.69□□□□□ -0.06
E2F3O00716 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.69□□□□□ -0.06
E2F3O00716 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
E2F3O00716 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
E2F3O00716 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
E2F3O00716 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
E2F3O00716 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms