Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 CCNB1IP1P3-201ENST00000454702 829 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AC011294.1-201ENST00000487094 844 ntTSL 3 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AC107222.1-201ENST00000510899 637 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 ST3GAL1P1-201ENST00000513810 1014 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 RN7SKP13-201ENST00000515933 244 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 Y_RNA.720-201ENST00000517166 92 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AC113191.1-201ENST00000517759 403 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AC090424.1-201ENST00000535243 736 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AC007552.1-201ENST00000540992 927 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AC011270.1-201ENST00000558606 583 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AC116553.2-201ENST00000564203 463 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AC093249.1-201ENST00000567049 203 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AL353996.1-201ENST00000581889 232 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 NPM1P45-201ENST00000583151 559 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 KRT18P61-201ENST00000585825 1298 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 XIAPP1-201ENST00000603162 600 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AC018462.2-201ENST00000605375 395 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AL139418.1-201ENST00000613613 177 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AC026951.2-201ENST00000613847 241 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AC093323.3-201ENST00000632627 949 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 BMS1P1-201ENST00000374336 1332 ntBASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 ADD3-AS1-202ENST00000369657 1882 ntTSL 5 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 NKAPL-201ENST00000343684 1639 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 NLRC4-201ENST00000342905 1362 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 ZNF124-201ENST00000340684 1674 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-3Q9BYR6 TMSB15B-208ENST00000620307 2286 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 NR1I3-223ENST00000506209 1441 ntTSL 2 BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 AC022144.1-201ENST00000602255 1580 ntBASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 OR13H1-201ENST00000338616 927 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 EIF4E2-206ENST00000409495 1014 ntTSL 2 BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 AC074019.1-201ENST00000428788 1096 ntBASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 AC097381.1-201ENST00000429019 1296 ntBASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 AC013410.1-201ENST00000436223 1232 ntBASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 RPL6P5-201ENST00000445678 828 ntBASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 LAPTM4BP1-201ENST00000447781 690 ntBASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 AC090096.1-201ENST00000489168 390 ntBASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 ST13P4-201ENST00000495613 1093 ntBASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC9.73□□□□□ -0.85
KRTAP3-3Q9BYR6 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC9.73□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 330.6 ms