Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 AC026410.3-201ENST00000514280 936 ntBASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 INE2-201ENST00000630399 1874 ntBASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC44A1Q8WWI5 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 AC092580.3-201ENST00000430932 139 ntBASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 AC140878.1-201ENST00000565277 250 ntBASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 AC107373.2-201ENST00000607735 490 ntBASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
SLC44A1Q8WWI5 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 KLF2P3-201ENST00000451977 1087 ntBASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 AC015911.4-201ENST00000588022 1070 ntBASIC15.1■□□□□ 0.01
SLC44A1Q8WWI5 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms