Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 MEP1AP4-201ENST00000423244 1087 ntBASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 AC026410.3-201ENST00000514280 936 ntBASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 RNA5SP421-201ENST00000516864 134 ntBASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 RRP7BP-205ENST00000566851 833 ntBASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 AL049840.4-201ENST00000602422 811 ntBASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 AC107373.2-201ENST00000607735 490 ntBASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 AC093525.8-201ENST00000624099 1342 ntBASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF439Q8NDP4 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 AL359258.3-201ENST00000622910 2331 ntBASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 UGT1A2P-201ENST00000454886 866 ntBASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 AC099568.2-201ENST00000609194 695 ntBASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 AC023908.3-201ENST00000564211 3047 ntBASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 AC007787.1-201ENST00000588095 1583 ntBASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
ZNF439Q8NDP4 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms