Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC012441.1-201ENST00000446669 685 ntBASIC14.69□□□□□ -0.06
YBX1P67809 CROCCP4-201ENST00000457096 498 ntBASIC14.69□□□□□ -0.06
YBX1P67809 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.69□□□□□ -0.06
YBX1P67809 AC022137.2-201ENST00000503482 481 ntBASIC14.69□□□□□ -0.06
YBX1P67809 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
YBX1P67809 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.69□□□□□ -0.06
YBX1P67809 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
YBX1P67809 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.69□□□□□ -0.06
YBX1P67809 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.69□□□□□ -0.06
YBX1P67809 AP005019.2-201ENST00000615104 511 ntBASIC14.69□□□□□ -0.06
YBX1P67809 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.69□□□□□ -0.06
YBX1P67809 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
YBX1P67809 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
YBX1P67809 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.69□□□□□ -0.06
YBX1P67809 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.69□□□□□ -0.06
YBX1P67809 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
YBX1P67809 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
YBX1P67809 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.68□□□□□ -0.06
YBX1P67809 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
YBX1P67809 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
YBX1P67809 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
YBX1P67809 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.68□□□□□ -0.06
YBX1P67809 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 ACKR1-201ENST00000368121 1240 ntBASIC14.68□□□□□ -0.06
YBX1P67809 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
YBX1P67809 EIF3FP3-201ENST00000434851 1086 ntBASIC14.68□□□□□ -0.06
YBX1P67809 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.68□□□□□ -0.06
YBX1P67809 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.68□□□□□ -0.06
YBX1P67809 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
YBX1P67809 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.68□□□□□ -0.06
YBX1P67809 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
YBX1P67809 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.68□□□□□ -0.06
YBX1P67809 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.68□□□□□ -0.06
YBX1P67809 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.68□□□□□ -0.06
YBX1P67809 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.68□□□□□ -0.06
YBX1P67809 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.68□□□□□ -0.06
YBX1P67809 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.68□□□□□ -0.06
YBX1P67809 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
YBX1P67809 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
YBX1P67809 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.68□□□□□ -0.06
YBX1P67809 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
YBX1P67809 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YBX1P67809 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
YBX1P67809 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
YBX1P67809 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.67□□□□□ -0.06
YBX1P67809 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
YBX1P67809 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YBX1P67809 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YBX1P67809 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
YBX1P67809 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
YBX1P67809 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.67□□□□□ -0.06
YBX1P67809 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
YBX1P67809 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.67□□□□□ -0.06
YBX1P67809 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
YBX1P67809 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YBX1P67809 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YBX1P67809 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YBX1P67809 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
YBX1P67809 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
YBX1P67809 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
YBX1P67809 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
YBX1P67809 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.67□□□□□ -0.06
YBX1P67809 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
YBX1P67809 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.67□□□□□ -0.06
YBX1P67809 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.67□□□□□ -0.06
YBX1P67809 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms