Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC19.78■□□□□ 0.76
CSB-PGBD3P0DP91 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSB-PGBD3P0DP91 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.78■□□□□ 0.76
CSB-PGBD3P0DP91 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSB-PGBD3P0DP91 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSB-PGBD3P0DP91 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSB-PGBD3P0DP91 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSB-PGBD3P0DP91 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CSB-PGBD3P0DP91 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.78■□□□□ 0.76
CSB-PGBD3P0DP91 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSB-PGBD3P0DP91 AC003102.2-201ENST00000589195 1469 ntBASIC19.78■□□□□ 0.76
CSB-PGBD3P0DP91 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSB-PGBD3P0DP91 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.78■□□□□ 0.76
CSB-PGBD3P0DP91 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSB-PGBD3P0DP91 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CSB-PGBD3P0DP91 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CSB-PGBD3P0DP91 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 NME2-201ENST00000393183 568 ntTSL 2 BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 FOS-204ENST00000554617 796 ntTSL 2 BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 MIR3677-201ENST00000578964 60 ntBASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CSB-PGBD3P0DP91 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.77■□□□□ 0.75
CSB-PGBD3P0DP91 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.75
CSB-PGBD3P0DP91 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CSB-PGBD3P0DP91 CYP51A1P3-201ENST00000400072 1428 ntBASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 AL512430.1-201ENST00000392575 860 ntBASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 AC006122.1-201ENST00000493323 440 ntBASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 AL031713.1-201ENST00000564813 661 ntBASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 NAT9-220ENST00000582870 896 ntTSL 5 BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 AC138894.2-201ENST00000602838 371 ntBASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 MEG3_2.1-201ENST00000611456 105 ntBASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 LINC01783-202ENST00000614408 828 ntBASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 BX284668.2-205ENST00000619677 828 ntBASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC19.76■□□□□ 0.75
CSB-PGBD3P0DP91 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 AC144522.1-201ENST00000625111 1658 ntBASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 API5-202ENST00000420461 2009 ntTSL 2 BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 LILRP1-201ENST00000444199 1370 ntBASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 RPL13AP19-201ENST00000434320 584 ntBASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 AL157407.1-201ENST00000435784 904 ntBASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC19.75■□□□□ 0.75
CSB-PGBD3P0DP91 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms