Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PRAMEF2O60811 KRT8P14-201ENST00000414254 1442 ntBASIC14.2□□□□□ -0.14
PRAMEF2O60811 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.2□□□□□ -0.14
PRAMEF2O60811 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF2O60811 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PRAMEF2O60811 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF2O60811 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF2O60811 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PRAMEF2O60811 AL359258.3-201ENST00000622910 2331 ntBASIC14.2□□□□□ -0.14
PRAMEF2O60811 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PRAMEF2O60811 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF2O60811 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.2□□□□□ -0.14
PRAMEF2O60811 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PRAMEF2O60811 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRAMEF2O60811 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.19□□□□□ -0.14
PRAMEF2O60811 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 AP002414.2-201ENST00000591780 3365 ntBASIC14.19□□□□□ -0.14
PRAMEF2O60811 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 RNU1-114P-201ENST00000365297 166 ntBASIC14.19□□□□□ -0.14
PRAMEF2O60811 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.19□□□□□ -0.14
PRAMEF2O60811 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 ACTBP11-201ENST00000436287 1126 ntBASIC14.19□□□□□ -0.14
PRAMEF2O60811 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 RN7SL219P-201ENST00000582872 296 ntBASIC14.19□□□□□ -0.14
PRAMEF2O60811 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 LILRP1-201ENST00000444199 1370 ntBASIC14.19□□□□□ -0.14
PRAMEF2O60811 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.19□□□□□ -0.14
PRAMEF2O60811 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PRAMEF2O60811 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 TUBB1P2-201ENST00000422712 1306 ntBASIC14.18□□□□□ -0.14
PRAMEF2O60811 TUBB1P1-201ENST00000503144 1300 ntBASIC14.18□□□□□ -0.14
PRAMEF2O60811 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 ACE3P-201ENST00000423435 1973 ntBASIC14.18□□□□□ -0.14
PRAMEF2O60811 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 AL157414.3-201ENST00000624276 1954 ntBASIC14.18□□□□□ -0.14
PRAMEF2O60811 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 KLF2P2-201ENST00000416807 1039 ntBASIC14.18□□□□□ -0.14
PRAMEF2O60811 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 HLA-K-203ENST00000430151 1046 ntBASIC14.18□□□□□ -0.14
PRAMEF2O60811 AL355994.2-201ENST00000447882 704 ntBASIC14.18□□□□□ -0.14
PRAMEF2O60811 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.18□□□□□ -0.14
PRAMEF2O60811 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PRAMEF2O60811 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms