Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 AC018665.1-201ENST00000622927 1362 ntBASIC13.45□□□□□ -0.26
TRAF3IP2O43734 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
TRAF3IP2O43734 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 AC134312.5-201ENST00000568031 1313 ntBASIC13.44□□□□□ -0.26
TRAF3IP2O43734 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 MTHFR-210ENST00000641407 2387 ntBASIC13.44□□□□□ -0.26
TRAF3IP2O43734 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 AC007389.4-201ENST00000454674 793 ntBASIC13.44□□□□□ -0.26
TRAF3IP2O43734 INE1-201ENST00000456273 945 ntBASIC13.44□□□□□ -0.26
TRAF3IP2O43734 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 AL358472.5-202ENST00000641448 1267 ntBASIC13.44□□□□□ -0.26
TRAF3IP2O43734 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
TRAF3IP2O43734 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 COCH-203ENST00000460581 2688 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 AC007292.2-201ENST00000593524 1812 ntBASIC13.43□□□□□ -0.26
TRAF3IP2O43734 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
TRAF3IP2O43734 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms