Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 AC067931.2-201ENST00000623655 2003 ntBASIC22.04■■□□□ 1.12
CDC42BPBQ9Y5S2 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 SF1-209ENST00000433274 2317 ntTSL 2 BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 COX20P1-201ENST00000366529 357 ntBASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 PPT1-215ENST00000641471 2368 ntBASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 HKR1-225ENST00000592168 566 ntTSL 4 BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 AC011471.3-201ENST00000623576 402 ntBASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDC42BPBQ9Y5S2 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CDC42BPBQ9Y5S2 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDC42BPBQ9Y5S2 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDC42BPBQ9Y5S2 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDC42BPBQ9Y5S2 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC22.02■■□□□ 1.12
CDC42BPBQ9Y5S2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDC42BPBQ9Y5S2 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
CDC42BPBQ9Y5S2 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDC42BPBQ9Y5S2 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC22.02■■□□□ 1.12
CDC42BPBQ9Y5S2 RN7SL564P-201ENST00000496309 250 ntBASIC22.02■■□□□ 1.12
CDC42BPBQ9Y5S2 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC22.02■■□□□ 1.12
CDC42BPBQ9Y5S2 AP003398.1-201ENST00000531124 318 ntBASIC22.02■■□□□ 1.12
CDC42BPBQ9Y5S2 KLF17P1-201ENST00000547105 1126 ntBASIC22.02■■□□□ 1.12
CDC42BPBQ9Y5S2 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC22.02■■□□□ 1.12
CDC42BPBQ9Y5S2 RN7SL357P-201ENST00000581065 298 ntBASIC22.02■■□□□ 1.12
CDC42BPBQ9Y5S2 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC22.02■■□□□ 1.12
CDC42BPBQ9Y5S2 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
CDC42BPBQ9Y5S2 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC22.02■■□□□ 1.12
CDC42BPBQ9Y5S2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDC42BPBQ9Y5S2 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDC42BPBQ9Y5S2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDC42BPBQ9Y5S2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CDC42BPBQ9Y5S2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC22.02■■□□□ 1.11
CDC42BPBQ9Y5S2 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 BAK1P1-201ENST00000317045 636 ntBASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 GCSHP3-201ENST00000431120 391 ntBASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 AL118522.1-201ENST00000611368 560 ntBASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CDC42BPBQ9Y5S2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPBQ9Y5S2 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDC42BPBQ9Y5S2 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC22■■□□□ 1.11
CDC42BPBQ9Y5S2 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC22■■□□□ 1.11
CDC42BPBQ9Y5S2 AC007250.1-201ENST00000608934 338 ntBASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms