Protein–RNA interactions for Protein: Q8IXR9

C12orf56, Uncharacterized protein C12orf56, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56Q8IXR9 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 AGGF1P1-201ENST00000509500 2073 ntBASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 AC004945.1-201ENST00000416738 983 ntBASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 CROCCP4-201ENST00000457096 498 ntBASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 C2orf69P2-201ENST00000562032 1123 ntBASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 AL035252.4-201ENST00000624174 288 ntBASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.27■□□□□ 0.2
C12orf56Q8IXR9 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
C12orf56Q8IXR9 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
C12orf56Q8IXR9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
C12orf56Q8IXR9 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
C12orf56Q8IXR9 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
C12orf56Q8IXR9 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
C12orf56Q8IXR9 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
C12orf56Q8IXR9 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
C12orf56Q8IXR9 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
C12orf56Q8IXR9 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.27■□□□□ 0.19
C12orf56Q8IXR9 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
C12orf56Q8IXR9 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 AC112492.5-201ENST00000421897 457 ntBASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 AC005034.1-201ENST00000426657 489 ntBASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 AHRR-211ENST00000515206 462 ntTSL 5 BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 KRT17P8-201ENST00000540749 863 ntBASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 RN7SL713P-201ENST00000582127 302 ntBASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 OR10B1P-201ENST00000601666 907 ntBASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 AL512343.1-201ENST00000605837 169 ntBASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 AC009093.2-202ENST00000620513 2079 ntBASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 AC015802.1-201ENST00000588104 1449 ntBASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 AL136172.1-201ENST00000598590 1394 ntBASIC16.26■□□□□ 0.19
C12orf56Q8IXR9 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C12orf56Q8IXR9 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C12orf56Q8IXR9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C12orf56Q8IXR9 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.25■□□□□ 0.19
C12orf56Q8IXR9 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C12orf56Q8IXR9 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C12orf56Q8IXR9 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.25■□□□□ 0.19
C12orf56Q8IXR9 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.25■□□□□ 0.19
C12orf56Q8IXR9 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
C12orf56Q8IXR9 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
C12orf56Q8IXR9 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
C12orf56Q8IXR9 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms