Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TOP2AP11388 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC25.55■■□□□ 1.68
TOP2AP11388 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TOP2AP11388 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TOP2AP11388 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC25.55■■□□□ 1.68
TOP2AP11388 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TOP2AP11388 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC25.55■■□□□ 1.68
TOP2AP11388 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
TOP2AP11388 AC234644.1-201ENST00000406065 370 ntBASIC25.55■■□□□ 1.68
TOP2AP11388 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
TOP2AP11388 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC25.55■■□□□ 1.68
TOP2AP11388 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC25.55■■□□□ 1.68
TOP2AP11388 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC25.55■■□□□ 1.68
TOP2AP11388 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TOP2AP11388 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
TOP2AP11388 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC25.55■■□□□ 1.68
TOP2AP11388 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TOP2AP11388 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
TOP2AP11388 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC25.55■■□□□ 1.68
TOP2AP11388 AC025183.3-201ENST00000623526 1482 ntBASIC25.55■■□□□ 1.68
TOP2AP11388 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
TOP2AP11388 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TOP2AP11388 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC25.54■■□□□ 1.68
TOP2AP11388 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC25.54■■□□□ 1.68
TOP2AP11388 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC25.54■■□□□ 1.68
TOP2AP11388 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
TOP2AP11388 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC25.54■■□□□ 1.68
TOP2AP11388 PPOX-204ENST00000462866 473 ntTSL 5 BASIC25.54■■□□□ 1.68
TOP2AP11388 AC095040.1-201ENST00000513286 675 ntBASIC25.54■■□□□ 1.68
TOP2AP11388 IGHV1-12-201ENST00000518307 205 ntBASIC25.54■■□□□ 1.68
TOP2AP11388 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC25.54■■□□□ 1.68
TOP2AP11388 RN7SL357P-201ENST00000581065 298 ntBASIC25.54■■□□□ 1.68
TOP2AP11388 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC25.54■■□□□ 1.68
TOP2AP11388 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
TOP2AP11388 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC25.54■■□□□ 1.68
TOP2AP11388 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TOP2AP11388 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
TOP2AP11388 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TOP2AP11388 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC25.54■■□□□ 1.68
TOP2AP11388 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
TOP2AP11388 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC25.54■■□□□ 1.68
TOP2AP11388 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TOP2AP11388 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC25.53■■□□□ 1.68
TOP2AP11388 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC25.53■■□□□ 1.68
TOP2AP11388 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC25.53■■□□□ 1.68
TOP2AP11388 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC25.53■■□□□ 1.68
TOP2AP11388 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC25.53■■□□□ 1.68
TOP2AP11388 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC25.53■■□□□ 1.68
TOP2AP11388 AC093909.3-201ENST00000504783 336 ntBASIC25.53■■□□□ 1.68
TOP2AP11388 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC25.53■■□□□ 1.68
TOP2AP11388 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC25.53■■□□□ 1.68
TOP2AP11388 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC25.53■■□□□ 1.68
TOP2AP11388 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC25.53■■□□□ 1.68
TOP2AP11388 AL133467.4-201ENST00000602953 725 ntBASIC25.53■■□□□ 1.68
TOP2AP11388 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
TOP2AP11388 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TOP2AP11388 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
TOP2AP11388 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC25.53■■□□□ 1.68
TOP2AP11388 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
TOP2AP11388 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
TOP2AP11388 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
TOP2AP11388 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TOP2AP11388 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TOP2AP11388 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC25.53■■□□□ 1.68
TOP2AP11388 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
TOP2AP11388 AGGF1P1-201ENST00000509500 2073 ntBASIC25.53■■□□□ 1.68
TOP2AP11388 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC25.53■■□□□ 1.68
TOP2AP11388 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TOP2AP11388 BAK1P1-201ENST00000317045 636 ntBASIC25.53■■□□□ 1.68
TOP2AP11388 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TOP2AP11388 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TOP2AP11388 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TOP2AP11388 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TOP2AP11388 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC25.53■■□□□ 1.68
TOP2AP11388 AC098934.1-203ENST00000442868 1262 ntBASIC25.53■■□□□ 1.68
TOP2AP11388 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC25.53■■□□□ 1.68
TOP2AP11388 AC006158.1-201ENST00000610661 249 ntBASIC25.53■■□□□ 1.68
TOP2AP11388 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC25.52■■□□□ 1.68
TOP2AP11388 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TOP2AP11388 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TOP2AP11388 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TOP2AP11388 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TOP2AP11388 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
TOP2AP11388 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TOP2AP11388 LAP3P2-201ENST00000454686 1454 ntBASIC25.52■■□□□ 1.68
TOP2AP11388 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TOP2AP11388 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC25.52■■□□□ 1.68
TOP2AP11388 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TOP2AP11388 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
TOP2AP11388 NSD1-211ENST00000511258 809 ntTSL 3 BASIC25.52■■□□□ 1.68
TOP2AP11388 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC25.52■■□□□ 1.68
TOP2AP11388 OR5BD1P-201ENST00000532527 817 ntBASIC25.52■■□□□ 1.68
TOP2AP11388 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC25.52■■□□□ 1.68
TOP2AP11388 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC25.52■■□□□ 1.68
TOP2AP11388 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC25.52■■□□□ 1.68
TOP2AP11388 AC012073.1-201ENST00000606114 1108 ntBASIC25.52■■□□□ 1.68
TOP2AP11388 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TOP2AP11388 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TOP2AP11388 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
TOP2AP11388 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms