Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RCCD1A6NED2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RCCD1A6NED2 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RCCD1A6NED2 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RCCD1A6NED2 INE2-201ENST00000630399 1874 ntBASIC16.05■□□□□ 0.16
RCCD1A6NED2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RCCD1A6NED2 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCCD1A6NED2 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCCD1A6NED2 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 AC130686.1-201ENST00000622936 2466 ntBASIC16.05■□□□□ 0.16
RCCD1A6NED2 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCCD1A6NED2 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCCD1A6NED2 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCCD1A6NED2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RCCD1A6NED2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 MIR1233-2-201ENST00000408138 82 ntBASIC16.05■□□□□ 0.16
RCCD1A6NED2 MIR1233-1-201ENST00000408722 82 ntBASIC16.05■□□□□ 0.16
RCCD1A6NED2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCCD1A6NED2 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCCD1A6NED2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 AC009407.1-201ENST00000568958 598 ntBASIC16.05■□□□□ 0.16
RCCD1A6NED2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 AC107373.2-201ENST00000607735 490 ntBASIC16.05■□□□□ 0.16
RCCD1A6NED2 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 AC134684.3-201ENST00000641758 218 ntBASIC16.05■□□□□ 0.16
RCCD1A6NED2 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCCD1A6NED2 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RCCD1A6NED2 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCCD1A6NED2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RCCD1A6NED2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCCD1A6NED2 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RCCD1A6NED2 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCCD1A6NED2 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCCD1A6NED2 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
RCCD1A6NED2 AL138799.1-201ENST00000448213 1675 ntBASIC16.05■□□□□ 0.16
RCCD1A6NED2 AC068587.6-202ENST00000641839 5619 ntBASIC16.05■□□□□ 0.16
RCCD1A6NED2 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RCCD1A6NED2 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCCD1A6NED2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RCCD1A6NED2 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCCD1A6NED2 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCCD1A6NED2 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RCCD1A6NED2 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RCCD1A6NED2 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RCCD1A6NED2 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RCCD1A6NED2 AC125807.1-201ENST00000483097 614 ntBASIC16.04■□□□□ 0.16
RCCD1A6NED2 AC097493.3-201ENST00000509725 367 ntBASIC16.04■□□□□ 0.16
RCCD1A6NED2 AC069120.2-201ENST00000524091 540 ntBASIC16.04■□□□□ 0.16
RCCD1A6NED2 AC006518.1-201ENST00000541449 943 ntBASIC16.04■□□□□ 0.16
RCCD1A6NED2 TIMM17BP1-201ENST00000545713 516 ntBASIC16.04■□□□□ 0.16
RCCD1A6NED2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 AL596442.2-201ENST00000610240 980 ntBASIC16.04■□□□□ 0.16
RCCD1A6NED2 AC004790.1-201ENST00000612686 536 ntBASIC16.04■□□□□ 0.16
RCCD1A6NED2 AL662799.1-202ENST00000614205 422 ntBASIC16.04■□□□□ 0.16
RCCD1A6NED2 AL590560.3-201ENST00000623350 461 ntBASIC16.04■□□□□ 0.16
RCCD1A6NED2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.04■□□□□ 0.16
RCCD1A6NED2 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC16.04■□□□□ 0.16
RCCD1A6NED2 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RCCD1A6NED2 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms