Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.41■□□□□ 0.06
EBF1Q9UH73 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.41■□□□□ 0.06
EBF1Q9UH73 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
EBF1Q9UH73 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EBF1Q9UH73 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EBF1Q9UH73 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EBF1Q9UH73 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
EBF1Q9UH73 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EBF1Q9UH73 LINC02447-202ENST00000501888 2146 ntBASIC15.41■□□□□ 0.06
EBF1Q9UH73 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EBF1Q9UH73 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.41■□□□□ 0.06
EBF1Q9UH73 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
EBF1Q9UH73 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
EBF1Q9UH73 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EBF1Q9UH73 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.41■□□□□ 0.06
EBF1Q9UH73 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
EBF1Q9UH73 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
EBF1Q9UH73 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
EBF1Q9UH73 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
EBF1Q9UH73 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.4■□□□□ 0.06
EBF1Q9UH73 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
EBF1Q9UH73 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EBF1Q9UH73 PRAL-201ENST00000624952 3286 ntBASIC15.4■□□□□ 0.06
EBF1Q9UH73 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EBF1Q9UH73 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EBF1Q9UH73 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.4■□□□□ 0.06
EBF1Q9UH73 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EBF1Q9UH73 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EBF1Q9UH73 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.4■□□□□ 0.06
EBF1Q9UH73 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EBF1Q9UH73 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EBF1Q9UH73 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
EBF1Q9UH73 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EBF1Q9UH73 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.4■□□□□ 0.06
EBF1Q9UH73 FAM8A4P-201ENST00000435433 1213 ntBASIC15.4■□□□□ 0.06
EBF1Q9UH73 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.4■□□□□ 0.06
EBF1Q9UH73 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.4■□□□□ 0.06
EBF1Q9UH73 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
EBF1Q9UH73 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.4■□□□□ 0.06
EBF1Q9UH73 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.4■□□□□ 0.06
EBF1Q9UH73 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.4■□□□□ 0.06
EBF1Q9UH73 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC15.4■□□□□ 0.06
EBF1Q9UH73 AC007663.3-201ENST00000609632 465 ntBASIC15.4■□□□□ 0.06
EBF1Q9UH73 AC138649.2-201ENST00000615886 705 ntBASIC15.4■□□□□ 0.06
EBF1Q9UH73 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.4■□□□□ 0.06
EBF1Q9UH73 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
EBF1Q9UH73 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EBF1Q9UH73 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EBF1Q9UH73 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
EBF1Q9UH73 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
EBF1Q9UH73 NORAD-201ENST00000565493 5339 ntBASIC15.4■□□□□ 0.06
EBF1Q9UH73 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
EBF1Q9UH73 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EBF1Q9UH73 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
EBF1Q9UH73 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
EBF1Q9UH73 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EBF1Q9UH73 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.4■□□□□ 0.06
EBF1Q9UH73 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.4■□□□□ 0.06
EBF1Q9UH73 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
EBF1Q9UH73 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
EBF1Q9UH73 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
EBF1Q9UH73 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
EBF1Q9UH73 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
EBF1Q9UH73 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
EBF1Q9UH73 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.39■□□□□ 0.05
EBF1Q9UH73 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EBF1Q9UH73 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EBF1Q9UH73 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EBF1Q9UH73 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
EBF1Q9UH73 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.39■□□□□ 0.05
EBF1Q9UH73 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.39■□□□□ 0.05
EBF1Q9UH73 AC063926.3-201ENST00000624734 5658 ntBASIC15.39■□□□□ 0.05
EBF1Q9UH73 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.39■□□□□ 0.05
EBF1Q9UH73 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
EBF1Q9UH73 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
EBF1Q9UH73 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EBF1Q9UH73 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.39■□□□□ 0.05
EBF1Q9UH73 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EBF1Q9UH73 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.39■□□□□ 0.05
EBF1Q9UH73 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EBF1Q9UH73 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.39■□□□□ 0.05
EBF1Q9UH73 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EBF1Q9UH73 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.39■□□□□ 0.05
EBF1Q9UH73 AL008707.1-201ENST00000422498 534 ntBASIC15.39■□□□□ 0.05
EBF1Q9UH73 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.39■□□□□ 0.05
EBF1Q9UH73 AC016700.1-201ENST00000429424 312 ntBASIC15.39■□□□□ 0.05
EBF1Q9UH73 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
EBF1Q9UH73 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
EBF1Q9UH73 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.39■□□□□ 0.05
EBF1Q9UH73 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.39■□□□□ 0.05
EBF1Q9UH73 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.39■□□□□ 0.05
EBF1Q9UH73 CHMP4BP1-201ENST00000556017 588 ntBASIC15.39■□□□□ 0.05
EBF1Q9UH73 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.39■□□□□ 0.05
EBF1Q9UH73 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.39■□□□□ 0.05
EBF1Q9UH73 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
EBF1Q9UH73 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.39■□□□□ 0.05
EBF1Q9UH73 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EBF1Q9UH73 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
EBF1Q9UH73 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.39■□□□□ 0.05
EBF1Q9UH73 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms