Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 WASH3P-207ENST00000560956 1394 ntBASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 AC020907.1-201ENST00000616460 1350 ntBASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 AC103702.1-201ENST00000548801 2630 ntBASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.42□□□□□ -0.26
CLCF1Q9UBD9 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 HSPB1P2-201ENST00000448722 546 ntBASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 AL096828.3-201ENST00000615354 462 ntBASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 AC244157.2-201ENST00000616239 1006 ntBASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 PAUPAR-201ENST00000630360 2965 ntBASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 KRT8P4-201ENST00000509735 1454 ntBASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.41□□□□□ -0.26
CLCF1Q9UBD9 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 FKBP4P6-201ENST00000457486 1332 ntBASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 AC004945.1-201ENST00000416738 983 ntBASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 AC006033.1-201ENST00000440505 426 ntBASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 CHMP1AP1-201ENST00000445563 662 ntBASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.4□□□□□ -0.26
CLCF1Q9UBD9 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms