Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 MTND4LP12-201ENST00000448237 295 ntBASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 AC114812.1-204ENST00000449669 728 ntBASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 CHCHD2P9-201ENST00000461726 456 ntBASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 AC093909.3-201ENST00000504783 336 ntBASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 ABHD17AP9-201ENST00000561925 548 ntBASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 MIR4522-201ENST00000584932 87 ntBASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 CR392039.1-201ENST00000623217 204 ntBASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 AL451007.2-201ENST00000632004 563 ntBASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNTNAP3Q9BZ76 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 STK16-203ENST00000409516 895 ntTSL 2 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 AC026320.2-201ENST00000434379 478 ntBASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 AC092638.2-201ENST00000441105 947 ntBASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 AL132994.2-201ENST00000603120 687 ntBASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 GPAA1P2-202ENST00000606848 1787 ntBASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CNTNAP3Q9BZ76 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 AC092171.3-201ENST00000610122 2651 ntBASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 AC239868.1-201ENST00000369385 493 ntBASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 NUDT4P2-201ENST00000578341 546 ntBASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 MIR3180-2-201ENST00000581748 88 ntBASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms