Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN18Q99952 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN18Q99952 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN18Q99952 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN18Q99952 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.96■□□□□ 0.31
PTPN18Q99952 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN18Q99952 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.96■□□□□ 0.31
PTPN18Q99952 AP000845.1-201ENST00000581677 2131 ntBASIC16.96■□□□□ 0.31
PTPN18Q99952 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN18Q99952 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN18Q99952 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN18Q99952 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN18Q99952 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.96■□□□□ 0.31
PTPN18Q99952 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN18Q99952 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN18Q99952 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PTPN18Q99952 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN18Q99952 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN18Q99952 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PTPN18Q99952 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.96■□□□□ 0.31
PTPN18Q99952 AQP7P5-201ENST00000428759 1049 ntBASIC16.96■□□□□ 0.31
PTPN18Q99952 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.96■□□□□ 0.31
PTPN18Q99952 AQP7P4-201ENST00000447083 1042 ntBASIC16.96■□□□□ 0.31
PTPN18Q99952 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN18Q99952 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN18Q99952 AQP7P2-201ENST00000453967 1041 ntBASIC16.96■□□□□ 0.31
PTPN18Q99952 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.96■□□□□ 0.31
PTPN18Q99952 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.96■□□□□ 0.31
PTPN18Q99952 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.96■□□□□ 0.31
PTPN18Q99952 RNA5SP417-201ENST00000516459 108 ntBASIC16.96■□□□□ 0.31
PTPN18Q99952 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC16.96■□□□□ 0.31
PTPN18Q99952 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.96■□□□□ 0.31
PTPN18Q99952 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
PTPN18Q99952 AC068025.1-201ENST00000577218 762 ntTSL 3 BASIC16.96■□□□□ 0.31
PTPN18Q99952 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC16.96■□□□□ 0.31
PTPN18Q99952 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC16.96■□□□□ 0.31
PTPN18Q99952 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN18Q99952 AQP7P3-201ENST00000624547 1041 ntBASIC16.96■□□□□ 0.31
PTPN18Q99952 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN18Q99952 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.96■□□□□ 0.31
PTPN18Q99952 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PTPN18Q99952 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN18Q99952 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.96■□□□□ 0.31
PTPN18Q99952 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN18Q99952 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PTPN18Q99952 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.96■□□□□ 0.31
PTPN18Q99952 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PTPN18Q99952 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PTPN18Q99952 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PTPN18Q99952 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.96■□□□□ 0.3
PTPN18Q99952 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
PTPN18Q99952 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
PTPN18Q99952 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PTPN18Q99952 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PTPN18Q99952 AHCYP4-201ENST00000419201 1315 ntBASIC16.96■□□□□ 0.3
PTPN18Q99952 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN18Q99952 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN18Q99952 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN18Q99952 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.95■□□□□ 0.3
PTPN18Q99952 PRAL-201ENST00000624952 3286 ntBASIC16.95■□□□□ 0.3
PTPN18Q99952 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN18Q99952 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN18Q99952 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN18Q99952 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PTPN18Q99952 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN18Q99952 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN18Q99952 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN18Q99952 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN18Q99952 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN18Q99952 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN18Q99952 GUSBP10-201ENST00000417412 665 ntBASIC16.95■□□□□ 0.3
PTPN18Q99952 HCG27-204ENST00000424675 895 ntTSL 3 BASIC16.95■□□□□ 0.3
PTPN18Q99952 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC16.95■□□□□ 0.3
PTPN18Q99952 DPY19L2P5-201ENST00000456300 331 ntBASIC16.95■□□□□ 0.3
PTPN18Q99952 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.95■□□□□ 0.3
PTPN18Q99952 AREG-202ENST00000502307 956 ntTSL 5 BASIC16.95■□□□□ 0.3
PTPN18Q99952 AC007952.4-201ENST00000573866 637 ntBASIC16.95■□□□□ 0.3
PTPN18Q99952 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN18Q99952 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.95■□□□□ 0.3
PTPN18Q99952 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.95■□□□□ 0.3
PTPN18Q99952 AC148477.9-201ENST00000623974 539 ntBASIC16.95■□□□□ 0.3
PTPN18Q99952 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN18Q99952 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN18Q99952 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN18Q99952 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN18Q99952 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.95■□□□□ 0.3
PTPN18Q99952 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN18Q99952 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PTPN18Q99952 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN18Q99952 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PTPN18Q99952 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN18Q99952 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN18Q99952 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN18Q99952 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN18Q99952 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN18Q99952 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PTPN18Q99952 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PTPN18Q99952 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN18Q99952 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN18Q99952 KRT17P5-201ENST00000332088 839 ntBASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms