Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 MIR193BHG-211ENST00000641433 5365 ntBASIC11.67□□□□□ -0.54
HIST1H1AQ02539 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 AC004967.1-201ENST00000453589 447 ntBASIC11.67□□□□□ -0.54
HIST1H1AQ02539 SATB1-217ENST00000493952 626 ntTSL 3 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 SLED1-202ENST00000512051 380 ntBASIC11.67□□□□□ -0.54
HIST1H1AQ02539 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 AC134684.3-201ENST00000641758 218 ntBASIC11.67□□□□□ -0.54
HIST1H1AQ02539 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
HIST1H1AQ02539 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 AJ011931.1-201ENST00000618749 2492 ntBASIC11.66□□□□□ -0.54
HIST1H1AQ02539 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 AC027612.1-201ENST00000445234 2395 ntBASIC11.66□□□□□ -0.54
HIST1H1AQ02539 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 CALM1-205ENST00000553542 877 ntTSL 5 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC11.66□□□□□ -0.54
HIST1H1AQ02539 CICP11-201ENST00000434745 2827 ntBASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms