Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Col2a1P28481 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Col2a1P28481 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Col2a1P28481 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.44□□□□□ -0.26
Col2a1P28481 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Col2a1P28481 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.44□□□□□ -0.26
Col2a1P28481 Gm14892-201ENSMUST00000117636 267 ntBASIC13.44□□□□□ -0.26
Col2a1P28481 Gm16219-201ENSMUST00000120096 274 ntBASIC13.44□□□□□ -0.26
Col2a1P28481 Gm13937-201ENSMUST00000121000 988 ntBASIC13.44□□□□□ -0.26
Col2a1P28481 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.44□□□□□ -0.26
Col2a1P28481 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC13.44□□□□□ -0.26
Col2a1P28481 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC13.44□□□□□ -0.26
Col2a1P28481 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Gm17709-201ENSMUST00000174536 1096 ntBASIC13.44□□□□□ -0.26
Col2a1P28481 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.44□□□□□ -0.26
Col2a1P28481 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.44□□□□□ -0.26
Col2a1P28481 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Col2a1P28481 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Col2a1P28481 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Col2a1P28481 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Col2a1P28481 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Col2a1P28481 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.44□□□□□ -0.26
Col2a1P28481 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col2a1P28481 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.43□□□□□ -0.26
Col2a1P28481 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.43□□□□□ -0.26
Col2a1P28481 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col2a1P28481 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col2a1P28481 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col2a1P28481 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Col2a1P28481 Gm13182-201ENSMUST00000122241 312 ntBASIC13.43□□□□□ -0.26
Col2a1P28481 Gm22442-201ENSMUST00000157256 144 ntBASIC13.43□□□□□ -0.26
Col2a1P28481 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col2a1P28481 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.43□□□□□ -0.26
Col2a1P28481 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Col2a1P28481 Gm43058-201ENSMUST00000197645 625 ntBASIC13.43□□□□□ -0.26
Col2a1P28481 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col2a1P28481 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.43□□□□□ -0.26
Col2a1P28481 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Col2a1P28481 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.43□□□□□ -0.26
Col2a1P28481 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC13.43□□□□□ -0.26
Col2a1P28481 AC122891.1-201ENSMUST00000218671 268 ntBASIC13.43□□□□□ -0.26
Col2a1P28481 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Col2a1P28481 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Col2a1P28481 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col2a1P28481 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col2a1P28481 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col2a1P28481 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Col2a1P28481 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Col2a1P28481 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col2a1P28481 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC13.43□□□□□ -0.26
Col2a1P28481 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col2a1P28481 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col2a1P28481 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Col2a1P28481 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.43□□□□□ -0.26
Col2a1P28481 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Col2a1P28481 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.43□□□□□ -0.26
Col2a1P28481 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Col2a1P28481 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Gm14740-201ENSMUST00000118538 1150 ntBASIC13.42□□□□□ -0.26
Col2a1P28481 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC13.42□□□□□ -0.26
Col2a1P28481 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC13.42□□□□□ -0.26
Col2a1P28481 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Col2a1P28481 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Gm10263-201ENSMUST00000085163 300 ntBASIC13.42□□□□□ -0.26
Col2a1P28481 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC13.42□□□□□ -0.26
Col2a1P28481 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Col2a1P28481 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Col2a1P28481 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms