Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A2P16615 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.77■□□□□ 0.27
ATP2A2P16615 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A2P16615 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A2P16615 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.77■□□□□ 0.27
ATP2A2P16615 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ATP2A2P16615 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
ATP2A2P16615 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A2P16615 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A2P16615 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP2A2P16615 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP2A2P16615 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A2P16615 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A2P16615 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A2P16615 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A2P16615 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP2A2P16615 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A2P16615 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP2A2P16615 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A2P16615 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A2P16615 MIR33B-201ENST00000385104 96 ntBASIC16.76■□□□□ 0.27
ATP2A2P16615 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A2P16615 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
ATP2A2P16615 KLF2P2-201ENST00000416807 1039 ntBASIC16.76■□□□□ 0.27
ATP2A2P16615 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
ATP2A2P16615 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.76■□□□□ 0.27
ATP2A2P16615 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP2A2P16615 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A2P16615 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.76■□□□□ 0.27
ATP2A2P16615 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A2P16615 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.76■□□□□ 0.27
ATP2A2P16615 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.76■□□□□ 0.27
ATP2A2P16615 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP2A2P16615 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.76■□□□□ 0.27
ATP2A2P16615 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP2A2P16615 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP2A2P16615 MIR7845-201ENST00000618396 99 ntBASIC16.76■□□□□ 0.27
ATP2A2P16615 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP2A2P16615 FAM45BP-202ENST00000592932 1624 ntBASIC16.76■□□□□ 0.27
ATP2A2P16615 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP2A2P16615 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A2P16615 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A2P16615 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
ATP2A2P16615 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A2P16615 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A2P16615 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP2A2P16615 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP2A2P16615 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATP2A2P16615 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP2A2P16615 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.75■□□□□ 0.27
ATP2A2P16615 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.75■□□□□ 0.27
ATP2A2P16615 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.75■□□□□ 0.27
ATP2A2P16615 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ATP2A2P16615 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ATP2A2P16615 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP2A2P16615 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ATP2A2P16615 AC097376.2-205ENST00000610159 5334 ntBASIC16.75■□□□□ 0.27
ATP2A2P16615 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ATP2A2P16615 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP2A2P16615 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
ATP2A2P16615 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ATP2A2P16615 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP2A2P16615 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.75■□□□□ 0.27
ATP2A2P16615 NKAIN1P1-201ENST00000435754 582 ntBASIC16.75■□□□□ 0.27
ATP2A2P16615 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.75■□□□□ 0.27
ATP2A2P16615 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
ATP2A2P16615 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
ATP2A2P16615 SPTLC1P5-201ENST00000450718 252 ntBASIC16.75■□□□□ 0.27
ATP2A2P16615 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ATP2A2P16615 AC044849.1-201ENST00000519737 1188 ntBASIC16.75■□□□□ 0.27
ATP2A2P16615 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.75■□□□□ 0.27
ATP2A2P16615 AC244157.2-201ENST00000616239 1006 ntBASIC16.75■□□□□ 0.27
ATP2A2P16615 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP2A2P16615 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
ATP2A2P16615 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP2A2P16615 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP2A2P16615 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ATP2A2P16615 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATP2A2P16615 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms