Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.88■□□□□ 0.13
APOEP02649 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.88■□□□□ 0.13
APOEP02649 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.88■□□□□ 0.13
APOEP02649 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.88■□□□□ 0.13
APOEP02649 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
APOEP02649 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
APOEP02649 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.88■□□□□ 0.13
APOEP02649 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
APOEP02649 AC005229.1-201ENST00000392885 409 ntBASIC15.88■□□□□ 0.13
APOEP02649 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.88■□□□□ 0.13
APOEP02649 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.88■□□□□ 0.13
APOEP02649 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.88■□□□□ 0.13
APOEP02649 GPR53P-205ENST00000457298 1084 ntBASIC15.88■□□□□ 0.13
APOEP02649 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
APOEP02649 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
APOEP02649 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.88■□□□□ 0.13
APOEP02649 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.88■□□□□ 0.13
APOEP02649 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.88■□□□□ 0.13
APOEP02649 PRSS30P-206ENST00000641773 873 ntBASIC15.88■□□□□ 0.13
APOEP02649 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
APOEP02649 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
APOEP02649 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.88■□□□□ 0.13
APOEP02649 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
APOEP02649 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
APOEP02649 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
APOEP02649 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
APOEP02649 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.88■□□□□ 0.13
APOEP02649 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
APOEP02649 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
APOEP02649 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
APOEP02649 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
APOEP02649 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
APOEP02649 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
APOEP02649 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
APOEP02649 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.87■□□□□ 0.13
APOEP02649 AC018665.1-201ENST00000622927 1362 ntBASIC15.87■□□□□ 0.13
APOEP02649 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
APOEP02649 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
APOEP02649 RPS15-201ENST00000233609 534 ntTSL 2 BASIC15.87■□□□□ 0.13
APOEP02649 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
APOEP02649 AL139094.1-201ENST00000405549 1188 ntBASIC15.87■□□□□ 0.13
APOEP02649 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.87■□□□□ 0.13
APOEP02649 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.87■□□□□ 0.13
APOEP02649 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.87■□□□□ 0.13
APOEP02649 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
APOEP02649 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 AP001889.1-201ENST00000525414 633 ntBASIC15.87■□□□□ 0.13
APOEP02649 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.87■□□□□ 0.13
APOEP02649 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.87■□□□□ 0.13
APOEP02649 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.87■□□□□ 0.13
APOEP02649 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.87■□□□□ 0.13
APOEP02649 AC106886.1-201ENST00000568660 600 ntBASIC15.87■□□□□ 0.13
APOEP02649 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.87■□□□□ 0.13
APOEP02649 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.87■□□□□ 0.13
APOEP02649 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.87■□□□□ 0.13
APOEP02649 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.87■□□□□ 0.13
APOEP02649 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.87■□□□□ 0.13
APOEP02649 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 AL162274.1-201ENST00000617191 1098 ntBASIC15.87■□□□□ 0.13
APOEP02649 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.87■□□□□ 0.13
APOEP02649 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.87■□□□□ 0.13
APOEP02649 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
APOEP02649 MSTO2P-201ENST00000314835 1709 ntBASIC15.87■□□□□ 0.13
APOEP02649 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.87■□□□□ 0.13
APOEP02649 LRRC59-203ENST00000576448 1531 ntBASIC15.87■□□□□ 0.13
APOEP02649 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.87■□□□□ 0.13
APOEP02649 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
APOEP02649 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
APOEP02649 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
APOEP02649 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
APOEP02649 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
APOEP02649 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
APOEP02649 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms