Protein–RNA interactions for Protein: Q99PI8

Rtn4r, Reticulon-4 receptor, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rQ99PI8 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn4rQ99PI8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn4rQ99PI8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn4rQ99PI8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn4rQ99PI8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn4rQ99PI8 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.2■□□□□ 0.5
Rtn4rQ99PI8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4rQ99PI8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4rQ99PI8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4rQ99PI8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4rQ99PI8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4rQ99PI8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
Rtn4rQ99PI8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4rQ99PI8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Rtn4rQ99PI8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4rQ99PI8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Rtn4rQ99PI8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.2■□□□□ 0.5
Rtn4rQ99PI8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4rQ99PI8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC18.19■□□□□ 0.5
Rtn4rQ99PI8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4rQ99PI8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4rQ99PI8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rtn4rQ99PI8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4rQ99PI8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4rQ99PI8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rtn4rQ99PI8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.18■□□□□ 0.5
Rtn4rQ99PI8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.18■□□□□ 0.5
Rtn4rQ99PI8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4rQ99PI8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4rQ99PI8 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.18■□□□□ 0.5
Rtn4rQ99PI8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4rQ99PI8 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Rtn4rQ99PI8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.18■□□□□ 0.5
Rtn4rQ99PI8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4rQ99PI8 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rtn4rQ99PI8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Rtn4rQ99PI8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
Rtn4rQ99PI8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rtn4rQ99PI8 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4rQ99PI8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Rtn4rQ99PI8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4rQ99PI8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4rQ99PI8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4rQ99PI8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4rQ99PI8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Rtn4rQ99PI8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rtn4rQ99PI8 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4rQ99PI8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4rQ99PI8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4rQ99PI8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rtn4rQ99PI8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4rQ99PI8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4rQ99PI8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rtn4rQ99PI8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4rQ99PI8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4rQ99PI8 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4rQ99PI8 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4rQ99PI8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rtn4rQ99PI8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4rQ99PI8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.15■□□□□ 0.5
Rtn4rQ99PI8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4rQ99PI8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4rQ99PI8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4rQ99PI8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
Rtn4rQ99PI8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
Rtn4rQ99PI8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Rtn4rQ99PI8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rtn4rQ99PI8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4rQ99PI8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4rQ99PI8 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.15■□□□□ 0.5
Rtn4rQ99PI8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rtn4rQ99PI8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
Rtn4rQ99PI8 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4rQ99PI8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4rQ99PI8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.14■□□□□ 0.49
Rtn4rQ99PI8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.14■□□□□ 0.49
Rtn4rQ99PI8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4rQ99PI8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4rQ99PI8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rtn4rQ99PI8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4rQ99PI8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4rQ99PI8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rtn4rQ99PI8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4rQ99PI8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4rQ99PI8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rtn4rQ99PI8 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4rQ99PI8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4rQ99PI8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4rQ99PI8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4rQ99PI8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4rQ99PI8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4rQ99PI8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4rQ99PI8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rtn4rQ99PI8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn4rQ99PI8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn4rQ99PI8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.11■□□□□ 0.49
Rtn4rQ99PI8 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rtn4rQ99PI8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rtn4rQ99PI8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rtn4rQ99PI8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms