Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
NBPF4Q96M43 MIR6089-201ENST00000616698 64 ntBASIC30.66■■■□□ 2.5
NBPF4Q96M43 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC30.66■■■□□ 2.5
NBPF4Q96M43 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC30.66■■■□□ 2.5
NBPF4Q96M43 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
NBPF4Q96M43 DUSP8P4-201ENST00000399538 1761 ntBASIC30.65■■■□□ 2.5
NBPF4Q96M43 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
NBPF4Q96M43 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
NBPF4Q96M43 MIR939-201ENST00000401314 82 ntBASIC30.65■■■□□ 2.5
NBPF4Q96M43 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC30.65■■■□□ 2.5
NBPF4Q96M43 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
NBPF4Q96M43 AC105265.2-201ENST00000467189 838 ntBASIC30.64■■■□□ 2.5
NBPF4Q96M43 LGR4-203ENST00000480977 492 ntTSL 2 BASIC30.64■■■□□ 2.5
NBPF4Q96M43 AP001330.3-201ENST00000520123 633 ntBASIC30.64■■■□□ 2.5
NBPF4Q96M43 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
NBPF4Q96M43 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30.64■■■□□ 2.49
NBPF4Q96M43 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
NBPF4Q96M43 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
NBPF4Q96M43 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC30.63■■■□□ 2.49
NBPF4Q96M43 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
NBPF4Q96M43 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC30.63■■■□□ 2.49
NBPF4Q96M43 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
NBPF4Q96M43 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
NBPF4Q96M43 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
NBPF4Q96M43 DUX4L19-201ENST00000557448 1267 ntBASIC30.63■■■□□ 2.49
NBPF4Q96M43 SF1-220ENST00000626028 704 ntTSL 2 BASIC30.63■■■□□ 2.49
NBPF4Q96M43 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
NBPF4Q96M43 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC30.62■■■□□ 2.49
NBPF4Q96M43 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC30.62■■■□□ 2.49
NBPF4Q96M43 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC30.62■■■□□ 2.49
NBPF4Q96M43 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
NBPF4Q96M43 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
NBPF4Q96M43 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
NBPF4Q96M43 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
NBPF4Q96M43 SERBP1P1-201ENST00000396021 1160 ntBASIC30.61■■■□□ 2.49
NBPF4Q96M43 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
NBPF4Q96M43 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
NBPF4Q96M43 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC30.61■■■□□ 2.49
NBPF4Q96M43 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC30.61■■■□□ 2.49
NBPF4Q96M43 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
NBPF4Q96M43 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
NBPF4Q96M43 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC30.6■■■□□ 2.49
NBPF4Q96M43 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC30.6■■■□□ 2.49
NBPF4Q96M43 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
NBPF4Q96M43 MIR4767-201ENST00000582827 78 ntBASIC30.6■■■□□ 2.49
NBPF4Q96M43 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
NBPF4Q96M43 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
NBPF4Q96M43 SYT6-210ENST00000641643 1587 ntBASIC30.6■■■□□ 2.49
NBPF4Q96M43 AC009102.2-201ENST00000606772 1639 ntBASIC30.59■■■□□ 2.49
NBPF4Q96M43 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC30.59■■■□□ 2.49
NBPF4Q96M43 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
NBPF4Q96M43 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
NBPF4Q96M43 STK32C-205ENST00000456004 607 ntTSL 2 BASIC30.59■■■□□ 2.49
NBPF4Q96M43 AC099791.2-201ENST00000605725 427 ntBASIC30.59■■■□□ 2.49
NBPF4Q96M43 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC30.59■■■□□ 2.49
NBPF4Q96M43 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
NBPF4Q96M43 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
NBPF4Q96M43 STOX2-205ENST00000513034 807 ntTSL 3 BASIC30.58■■■□□ 2.49
NBPF4Q96M43 LSR-205ENST00000427250 1606 ntTSL 2 BASIC30.58■■■□□ 2.49
NBPF4Q96M43 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
NBPF4Q96M43 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC30.57■■■□□ 2.48
NBPF4Q96M43 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC30.57■■■□□ 2.48
NBPF4Q96M43 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NBPF4Q96M43 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NBPF4Q96M43 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NBPF4Q96M43 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NBPF4Q96M43 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
NBPF4Q96M43 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC30.57■■■□□ 2.48
NBPF4Q96M43 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NBPF4Q96M43 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
NBPF4Q96M43 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
NBPF4Q96M43 CEBPA-AS1-201ENST00000592982 2198 ntBASIC30.56■■■□□ 2.48
NBPF4Q96M43 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC30.56■■■□□ 2.48
NBPF4Q96M43 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
NBPF4Q96M43 MAG-206ENST00000597035 542 ntTSL 4 BASIC30.56■■■□□ 2.48
NBPF4Q96M43 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
NBPF4Q96M43 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC30.56■■■□□ 2.48
NBPF4Q96M43 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
NBPF4Q96M43 AC091060.1-201ENST00000623524 1766 ntBASIC30.56■■■□□ 2.48
NBPF4Q96M43 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
NBPF4Q96M43 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
NBPF4Q96M43 PTMA-205ENST00000410064 814 ntTSL 2 BASIC30.54■■■□□ 2.48
NBPF4Q96M43 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
NBPF4Q96M43 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC30.54■■■□□ 2.48
NBPF4Q96M43 AC092666.2-201ENST00000613287 246 ntBASIC30.54■■■□□ 2.48
NBPF4Q96M43 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
NBPF4Q96M43 AL022069.1-201ENST00000568025 1636 ntBASIC30.52■■■□□ 2.48
NBPF4Q96M43 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
NBPF4Q96M43 RBM38-205ENST00000440234 686 ntTSL 2 BASIC30.52■■■□□ 2.48
NBPF4Q96M43 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
NBPF4Q96M43 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
NBPF4Q96M43 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
NBPF4Q96M43 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.48
NBPF4Q96M43 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
NBPF4Q96M43 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
NBPF4Q96M43 PTCHD3P2-201ENST00000424937 1205 ntBASIC30.51■■■□□ 2.47
NBPF4Q96M43 AC091305.1-201ENST00000479476 895 ntBASIC30.51■■■□□ 2.47
NBPF4Q96M43 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC30.51■■■□□ 2.47
NBPF4Q96M43 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
NBPF4Q96M43 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC30.51■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms