Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CNEP1R1Q8N9A8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNEP1R1Q8N9A8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNEP1R1Q8N9A8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNEP1R1Q8N9A8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNEP1R1Q8N9A8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNEP1R1Q8N9A8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.43■□□□□ 0.86
CNEP1R1Q8N9A8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNEP1R1Q8N9A8 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CNEP1R1Q8N9A8 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
CNEP1R1Q8N9A8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CNEP1R1Q8N9A8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CNEP1R1Q8N9A8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNEP1R1Q8N9A8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.42■□□□□ 0.86
CNEP1R1Q8N9A8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CNEP1R1Q8N9A8 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNEP1R1Q8N9A8 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CNEP1R1Q8N9A8 AC131274.2-201ENST00000580697 1507 ntBASIC20.42■□□□□ 0.86
CNEP1R1Q8N9A8 AL022069.1-201ENST00000568025 1636 ntBASIC20.42■□□□□ 0.86
CNEP1R1Q8N9A8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNEP1R1Q8N9A8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNEP1R1Q8N9A8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.41■□□□□ 0.86
CNEP1R1Q8N9A8 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNEP1R1Q8N9A8 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNEP1R1Q8N9A8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNEP1R1Q8N9A8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.41■□□□□ 0.86
CNEP1R1Q8N9A8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNEP1R1Q8N9A8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNEP1R1Q8N9A8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNEP1R1Q8N9A8 MIR4466-201ENST00000606121 54 ntBASIC20.4■□□□□ 0.86
CNEP1R1Q8N9A8 AC005703.6-201ENST00000623265 1329 ntBASIC20.4■□□□□ 0.86
CNEP1R1Q8N9A8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.4■□□□□ 0.86
CNEP1R1Q8N9A8 AC022211.4-201ENST00000625094 2161 ntBASIC20.4■□□□□ 0.86
CNEP1R1Q8N9A8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
CNEP1R1Q8N9A8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.39■□□□□ 0.85
CNEP1R1Q8N9A8 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.39■□□□□ 0.85
CNEP1R1Q8N9A8 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.39■□□□□ 0.85
CNEP1R1Q8N9A8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CNEP1R1Q8N9A8 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CNEP1R1Q8N9A8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.39■□□□□ 0.85
CNEP1R1Q8N9A8 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CNEP1R1Q8N9A8 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CNEP1R1Q8N9A8 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.39■□□□□ 0.85
CNEP1R1Q8N9A8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CNEP1R1Q8N9A8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNEP1R1Q8N9A8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CNEP1R1Q8N9A8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNEP1R1Q8N9A8 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNEP1R1Q8N9A8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNEP1R1Q8N9A8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNEP1R1Q8N9A8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.38■□□□□ 0.85
CNEP1R1Q8N9A8 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNEP1R1Q8N9A8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CNEP1R1Q8N9A8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.38■□□□□ 0.85
CNEP1R1Q8N9A8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CNEP1R1Q8N9A8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CNEP1R1Q8N9A8 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
CNEP1R1Q8N9A8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.37■□□□□ 0.85
CNEP1R1Q8N9A8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNEP1R1Q8N9A8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNEP1R1Q8N9A8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.37■□□□□ 0.85
CNEP1R1Q8N9A8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.37■□□□□ 0.85
CNEP1R1Q8N9A8 AL512631.2-201ENST00000604634 923 ntBASIC20.37■□□□□ 0.85
CNEP1R1Q8N9A8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNEP1R1Q8N9A8 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNEP1R1Q8N9A8 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.37■□□□□ 0.85
CNEP1R1Q8N9A8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CNEP1R1Q8N9A8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNEP1R1Q8N9A8 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CNEP1R1Q8N9A8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNEP1R1Q8N9A8 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CNEP1R1Q8N9A8 HLA-L-211ENST00000482052 1765 ntBASIC20.36■□□□□ 0.85
CNEP1R1Q8N9A8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNEP1R1Q8N9A8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.36■□□□□ 0.85
CNEP1R1Q8N9A8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNEP1R1Q8N9A8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNEP1R1Q8N9A8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CNEP1R1Q8N9A8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.36■□□□□ 0.85
CNEP1R1Q8N9A8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.36■□□□□ 0.85
CNEP1R1Q8N9A8 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.36■□□□□ 0.85
CNEP1R1Q8N9A8 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.36■□□□□ 0.85
CNEP1R1Q8N9A8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.36■□□□□ 0.85
CNEP1R1Q8N9A8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CNEP1R1Q8N9A8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.36■□□□□ 0.85
CNEP1R1Q8N9A8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNEP1R1Q8N9A8 AC019069.1-201ENST00000610008 1333 ntBASIC20.35■□□□□ 0.85
CNEP1R1Q8N9A8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNEP1R1Q8N9A8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CNEP1R1Q8N9A8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNEP1R1Q8N9A8 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNEP1R1Q8N9A8 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CNEP1R1Q8N9A8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNEP1R1Q8N9A8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CNEP1R1Q8N9A8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNEP1R1Q8N9A8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CNEP1R1Q8N9A8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CNEP1R1Q8N9A8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CNEP1R1Q8N9A8 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CNEP1R1Q8N9A8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.34■□□□□ 0.85
CNEP1R1Q8N9A8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms