Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Rdh1Q8CGV4 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.16■□□□□ 0.82
Rdh1Q8CGV4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.16■□□□□ 0.82
Rdh1Q8CGV4 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Rdh1Q8CGV4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rdh1Q8CGV4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Rdh1Q8CGV4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rdh1Q8CGV4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rdh1Q8CGV4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
Rdh1Q8CGV4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Rdh1Q8CGV4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Rdh1Q8CGV4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rdh1Q8CGV4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rdh1Q8CGV4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Rdh1Q8CGV4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rdh1Q8CGV4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Rdh1Q8CGV4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rdh1Q8CGV4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rdh1Q8CGV4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Rdh1Q8CGV4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rdh1Q8CGV4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rdh1Q8CGV4 Gm12821-201ENSMUST00000120022 600 ntBASIC20.14■□□□□ 0.81
Rdh1Q8CGV4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rdh1Q8CGV4 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.14■□□□□ 0.81
Rdh1Q8CGV4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Rdh1Q8CGV4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rdh1Q8CGV4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rdh1Q8CGV4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rdh1Q8CGV4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rdh1Q8CGV4 Gm27454-201ENSMUST00000185090 204 ntBASIC20.13■□□□□ 0.81
Rdh1Q8CGV4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rdh1Q8CGV4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rdh1Q8CGV4 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rdh1Q8CGV4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rdh1Q8CGV4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rdh1Q8CGV4 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rdh1Q8CGV4 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rdh1Q8CGV4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rdh1Q8CGV4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rdh1Q8CGV4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rdh1Q8CGV4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Rdh1Q8CGV4 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.11■□□□□ 0.81
Rdh1Q8CGV4 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.11■□□□□ 0.81
Rdh1Q8CGV4 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rdh1Q8CGV4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rdh1Q8CGV4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Rdh1Q8CGV4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rdh1Q8CGV4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rdh1Q8CGV4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rdh1Q8CGV4 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.11■□□□□ 0.81
Rdh1Q8CGV4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Rdh1Q8CGV4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rdh1Q8CGV4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rdh1Q8CGV4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rdh1Q8CGV4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rdh1Q8CGV4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rdh1Q8CGV4 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Rdh1Q8CGV4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rdh1Q8CGV4 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rdh1Q8CGV4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rdh1Q8CGV4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rdh1Q8CGV4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.09■□□□□ 0.81
Rdh1Q8CGV4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rdh1Q8CGV4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rdh1Q8CGV4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Rdh1Q8CGV4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rdh1Q8CGV4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.09■□□□□ 0.81
Rdh1Q8CGV4 Gm45417-201ENSMUST00000209533 758 ntBASIC20.09■□□□□ 0.81
Rdh1Q8CGV4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rdh1Q8CGV4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rdh1Q8CGV4 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rdh1Q8CGV4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rdh1Q8CGV4 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rdh1Q8CGV4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rdh1Q8CGV4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rdh1Q8CGV4 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rdh1Q8CGV4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rdh1Q8CGV4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rdh1Q8CGV4 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rdh1Q8CGV4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rdh1Q8CGV4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rdh1Q8CGV4 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rdh1Q8CGV4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Rdh1Q8CGV4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rdh1Q8CGV4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rdh1Q8CGV4 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rdh1Q8CGV4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
Rdh1Q8CGV4 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rdh1Q8CGV4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.07■□□□□ 0.8
Rdh1Q8CGV4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rdh1Q8CGV4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rdh1Q8CGV4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rdh1Q8CGV4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rdh1Q8CGV4 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rdh1Q8CGV4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rdh1Q8CGV4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rdh1Q8CGV4 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.06■□□□□ 0.8
Rdh1Q8CGV4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rdh1Q8CGV4 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rdh1Q8CGV4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms