Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SgcbP82349 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SgcbP82349 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SgcbP82349 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SgcbP82349 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SgcbP82349 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.41■□□□□ 0.54
SgcbP82349 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SgcbP82349 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SgcbP82349 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SgcbP82349 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SgcbP82349 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SgcbP82349 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SgcbP82349 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SgcbP82349 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.4■□□□□ 0.54
SgcbP82349 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.4■□□□□ 0.54
SgcbP82349 Gm22238-201ENSMUST00000175222 88 ntBASIC18.4■□□□□ 0.54
SgcbP82349 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SgcbP82349 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SgcbP82349 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SgcbP82349 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SgcbP82349 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SgcbP82349 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SgcbP82349 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SgcbP82349 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SgcbP82349 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
SgcbP82349 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SgcbP82349 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SgcbP82349 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SgcbP82349 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SgcbP82349 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SgcbP82349 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SgcbP82349 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.38■□□□□ 0.53
SgcbP82349 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.38■□□□□ 0.53
SgcbP82349 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SgcbP82349 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SgcbP82349 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.38■□□□□ 0.53
SgcbP82349 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.37■□□□□ 0.53
SgcbP82349 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SgcbP82349 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SgcbP82349 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SgcbP82349 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SgcbP82349 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SgcbP82349 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SgcbP82349 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SgcbP82349 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SgcbP82349 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SgcbP82349 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SgcbP82349 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SgcbP82349 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SgcbP82349 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SgcbP82349 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SgcbP82349 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SgcbP82349 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SgcbP82349 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SgcbP82349 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SgcbP82349 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.35■□□□□ 0.53
SgcbP82349 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
SgcbP82349 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.35■□□□□ 0.53
SgcbP82349 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SgcbP82349 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.35■□□□□ 0.53
SgcbP82349 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SgcbP82349 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SgcbP82349 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SgcbP82349 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SgcbP82349 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SgcbP82349 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.34■□□□□ 0.53
SgcbP82349 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.34■□□□□ 0.53
SgcbP82349 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SgcbP82349 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SgcbP82349 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SgcbP82349 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SgcbP82349 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SgcbP82349 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.34■□□□□ 0.53
SgcbP82349 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SgcbP82349 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
SgcbP82349 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SgcbP82349 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SgcbP82349 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SgcbP82349 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SgcbP82349 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SgcbP82349 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SgcbP82349 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
SgcbP82349 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SgcbP82349 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SgcbP82349 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SgcbP82349 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.32■□□□□ 0.52
SgcbP82349 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.32■□□□□ 0.52
SgcbP82349 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SgcbP82349 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SgcbP82349 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SgcbP82349 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SgcbP82349 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SgcbP82349 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SgcbP82349 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SgcbP82349 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SgcbP82349 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SgcbP82349 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SgcbP82349 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SgcbP82349 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SgcbP82349 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms