Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
FOXG1P55316 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXG1P55316 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
FOXG1P55316 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.26■□□□□ 0.83
FOXG1P55316 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.26■□□□□ 0.83
FOXG1P55316 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
FOXG1P55316 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXG1P55316 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXG1P55316 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXG1P55316 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXG1P55316 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.25■□□□□ 0.83
FOXG1P55316 MTDHP2-201ENST00000601468 714 ntBASIC20.25■□□□□ 0.83
FOXG1P55316 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
FOXG1P55316 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.25■□□□□ 0.83
FOXG1P55316 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.24■□□□□ 0.83
FOXG1P55316 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXG1P55316 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXG1P55316 LINC01124-201ENST00000409786 2117 ntBASIC20.24■□□□□ 0.83
FOXG1P55316 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FOXG1P55316 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.24■□□□□ 0.83
FOXG1P55316 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXG1P55316 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
FOXG1P55316 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.24■□□□□ 0.83
FOXG1P55316 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXG1P55316 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
FOXG1P55316 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXG1P55316 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXG1P55316 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXG1P55316 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXG1P55316 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
FOXG1P55316 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.23■□□□□ 0.83
FOXG1P55316 AL022069.1-201ENST00000568025 1636 ntBASIC20.23■□□□□ 0.83
FOXG1P55316 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
FOXG1P55316 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXG1P55316 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXG1P55316 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXG1P55316 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
FOXG1P55316 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.22■□□□□ 0.83
FOXG1P55316 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXG1P55316 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXG1P55316 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.22■□□□□ 0.83
FOXG1P55316 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.22■□□□□ 0.83
FOXG1P55316 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
FOXG1P55316 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXG1P55316 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXG1P55316 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXG1P55316 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXG1P55316 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
FOXG1P55316 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.21■□□□□ 0.83
FOXG1P55316 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXG1P55316 AC131212.1-201ENST00000613771 668 ntBASIC20.21■□□□□ 0.83
FOXG1P55316 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.21■□□□□ 0.83
FOXG1P55316 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXG1P55316 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.21■□□□□ 0.83
FOXG1P55316 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXG1P55316 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FOXG1P55316 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXG1P55316 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
FOXG1P55316 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.2■□□□□ 0.82
FOXG1P55316 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXG1P55316 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
FOXG1P55316 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXG1P55316 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
FOXG1P55316 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXG1P55316 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXG1P55316 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
FOXG1P55316 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXG1P55316 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXG1P55316 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXG1P55316 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXG1P55316 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXG1P55316 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXG1P55316 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.19■□□□□ 0.82
FOXG1P55316 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXG1P55316 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.19■□□□□ 0.82
FOXG1P55316 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXG1P55316 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXG1P55316 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXG1P55316 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXG1P55316 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
FOXG1P55316 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
FOXG1P55316 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXG1P55316 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXG1P55316 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXG1P55316 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXG1P55316 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXG1P55316 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.18■□□□□ 0.82
FOXG1P55316 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.18■□□□□ 0.82
FOXG1P55316 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXG1P55316 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.18■□□□□ 0.82
FOXG1P55316 MIR6722-201ENST00000617286 78 ntBASIC20.18■□□□□ 0.82
FOXG1P55316 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXG1P55316 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.18■□□□□ 0.82
FOXG1P55316 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FOXG1P55316 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
FOXG1P55316 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXG1P55316 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FOXG1P55316 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FOXG1P55316 MIR6724-1-201ENST00000616420 92 ntBASIC20.17■□□□□ 0.82
FOXG1P55316 MIR6724-2-201ENST00000616483 92 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms