Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.93■■□□□ 1.74
GGPS1O95749 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
GGPS1O95749 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
GGPS1O95749 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
GGPS1O95749 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
GGPS1O95749 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
GGPS1O95749 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
GGPS1O95749 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC25.92■■□□□ 1.74
GGPS1O95749 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
GGPS1O95749 REST-206ENST00000612429 1376 ntTSL 5 BASIC25.92■■□□□ 1.74
GGPS1O95749 REST-207ENST00000616975 1370 ntTSL 5 BASIC25.92■■□□□ 1.74
GGPS1O95749 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
GGPS1O95749 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
GGPS1O95749 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC25.92■■□□□ 1.74
GGPS1O95749 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC25.92■■□□□ 1.74
GGPS1O95749 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.91■■□□□ 1.74
GGPS1O95749 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
GGPS1O95749 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
GGPS1O95749 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
GGPS1O95749 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.91■■□□□ 1.74
GGPS1O95749 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.91■■□□□ 1.74
GGPS1O95749 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
GGPS1O95749 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
GGPS1O95749 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
GGPS1O95749 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
GGPS1O95749 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
GGPS1O95749 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
GGPS1O95749 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
GGPS1O95749 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
GGPS1O95749 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.9■■□□□ 1.74
GGPS1O95749 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
GGPS1O95749 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.9■■□□□ 1.74
GGPS1O95749 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
GGPS1O95749 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
GGPS1O95749 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
GGPS1O95749 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
GGPS1O95749 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
GGPS1O95749 AL022069.1-201ENST00000568025 1636 ntBASIC25.88■■□□□ 1.73
GGPS1O95749 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
GGPS1O95749 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
GGPS1O95749 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
GGPS1O95749 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
GGPS1O95749 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC25.88■■□□□ 1.73
GGPS1O95749 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.88■■□□□ 1.73
GGPS1O95749 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
GGPS1O95749 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
GGPS1O95749 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
GGPS1O95749 SRD5A1P1-201ENST00000442297 786 ntBASIC25.87■■□□□ 1.73
GGPS1O95749 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.87■■□□□ 1.73
GGPS1O95749 AC005837.3-201ENST00000612163 286 ntBASIC25.87■■□□□ 1.73
GGPS1O95749 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.87■■□□□ 1.73
GGPS1O95749 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC25.87■■□□□ 1.73
GGPS1O95749 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
GGPS1O95749 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
GGPS1O95749 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
GGPS1O95749 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.86■■□□□ 1.73
GGPS1O95749 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.86■■□□□ 1.73
GGPS1O95749 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
GGPS1O95749 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
GGPS1O95749 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC25.86■■□□□ 1.73
GGPS1O95749 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.85■■□□□ 1.73
GGPS1O95749 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
GGPS1O95749 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
GGPS1O95749 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.85■■□□□ 1.73
GGPS1O95749 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
GGPS1O95749 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.85■■□□□ 1.73
GGPS1O95749 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
GGPS1O95749 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.84■■□□□ 1.73
GGPS1O95749 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
GGPS1O95749 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
GGPS1O95749 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.84■■□□□ 1.73
GGPS1O95749 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
GGPS1O95749 MIR935-201ENST00000401179 91 ntBASIC25.84■■□□□ 1.73
GGPS1O95749 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
GGPS1O95749 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC25.84■■□□□ 1.73
GGPS1O95749 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
GGPS1O95749 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
GGPS1O95749 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
GGPS1O95749 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
GGPS1O95749 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
GGPS1O95749 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
GGPS1O95749 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
GGPS1O95749 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.83■■□□□ 1.73
GGPS1O95749 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.83■■□□□ 1.73
GGPS1O95749 UNC93B3-201ENST00000308076 687 ntBASIC25.83■■□□□ 1.73
GGPS1O95749 PBX2P1-201ENST00000493219 1291 ntBASIC25.83■■□□□ 1.73
GGPS1O95749 AC133561.4-201ENST00000566112 224 ntBASIC25.83■■□□□ 1.73
GGPS1O95749 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
GGPS1O95749 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC25.83■■□□□ 1.73
GGPS1O95749 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
GGPS1O95749 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.83■■□□□ 1.72
GGPS1O95749 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
GGPS1O95749 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
GGPS1O95749 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
GGPS1O95749 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.82■■□□□ 1.72
GGPS1O95749 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
GGPS1O95749 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
GGPS1O95749 AC106739.1-201ENST00000617035 715 ntBASIC25.82■■□□□ 1.72
GGPS1O95749 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
GGPS1O95749 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.82■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms