Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Trbc1A0A0A6YWV4 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
Trbc1A0A0A6YWV4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbc1A0A0A6YWV4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trbc1A0A0A6YWV4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Trbc1A0A0A6YWV4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Trbc1A0A0A6YWV4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.95■□□□□ 0.62
Trbc1A0A0A6YWV4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbc1A0A0A6YWV4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbc1A0A0A6YWV4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Trbc1A0A0A6YWV4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.94■□□□□ 0.62
Trbc1A0A0A6YWV4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Trbc1A0A0A6YWV4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbc1A0A0A6YWV4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Trbc1A0A0A6YWV4 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.94■□□□□ 0.62
Trbc1A0A0A6YWV4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Trbc1A0A0A6YWV4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.93■□□□□ 0.62
Trbc1A0A0A6YWV4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.93■□□□□ 0.62
Trbc1A0A0A6YWV4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbc1A0A0A6YWV4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbc1A0A0A6YWV4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbc1A0A0A6YWV4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Trbc1A0A0A6YWV4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Trbc1A0A0A6YWV4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.92■□□□□ 0.62
Trbc1A0A0A6YWV4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Trbc1A0A0A6YWV4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbc1A0A0A6YWV4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.92■□□□□ 0.62
Trbc1A0A0A6YWV4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbc1A0A0A6YWV4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.92■□□□□ 0.62
Trbc1A0A0A6YWV4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbc1A0A0A6YWV4 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.92■□□□□ 0.62
Trbc1A0A0A6YWV4 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbc1A0A0A6YWV4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbc1A0A0A6YWV4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbc1A0A0A6YWV4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Trbc1A0A0A6YWV4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbc1A0A0A6YWV4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Trbc1A0A0A6YWV4 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Trbc1A0A0A6YWV4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trbc1A0A0A6YWV4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Trbc1A0A0A6YWV4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trbc1A0A0A6YWV4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbc1A0A0A6YWV4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trbc1A0A0A6YWV4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Trbc1A0A0A6YWV4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.91■□□□□ 0.62
Trbc1A0A0A6YWV4 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbc1A0A0A6YWV4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbc1A0A0A6YWV4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Trbc1A0A0A6YWV4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbc1A0A0A6YWV4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Trbc1A0A0A6YWV4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbc1A0A0A6YWV4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbc1A0A0A6YWV4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbc1A0A0A6YWV4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbc1A0A0A6YWV4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Trbc1A0A0A6YWV4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Trbc1A0A0A6YWV4 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Trbc1A0A0A6YWV4 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbc1A0A0A6YWV4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.9■□□□□ 0.62
Trbc1A0A0A6YWV4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Trbc1A0A0A6YWV4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.89■□□□□ 0.62
Trbc1A0A0A6YWV4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Trbc1A0A0A6YWV4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbc1A0A0A6YWV4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Trbc1A0A0A6YWV4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.89■□□□□ 0.61
Trbc1A0A0A6YWV4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbc1A0A0A6YWV4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbc1A0A0A6YWV4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbc1A0A0A6YWV4 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Trbc1A0A0A6YWV4 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Trbc1A0A0A6YWV4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Trbc1A0A0A6YWV4 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.88■□□□□ 0.61
Trbc1A0A0A6YWV4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbc1A0A0A6YWV4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbc1A0A0A6YWV4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.88■□□□□ 0.61
Trbc1A0A0A6YWV4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbc1A0A0A6YWV4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbc1A0A0A6YWV4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbc1A0A0A6YWV4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Trbc1A0A0A6YWV4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Trbc1A0A0A6YWV4 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Trbc1A0A0A6YWV4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Trbc1A0A0A6YWV4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Trbc1A0A0A6YWV4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.87■□□□□ 0.61
Trbc1A0A0A6YWV4 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbc1A0A0A6YWV4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.87■□□□□ 0.61
Trbc1A0A0A6YWV4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Trbc1A0A0A6YWV4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbc1A0A0A6YWV4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbc1A0A0A6YWV4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbc1A0A0A6YWV4 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbc1A0A0A6YWV4 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trbc1A0A0A6YWV4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbc1A0A0A6YWV4 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.86■□□□□ 0.61
Trbc1A0A0A6YWV4 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbc1A0A0A6YWV4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbc1A0A0A6YWV4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbc1A0A0A6YWV4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trbc1A0A0A6YWV4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trbc1A0A0A6YWV4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms