Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP11P24347 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP11P24347 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP11P24347 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP11P24347 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
MMP11P24347 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.39□□□□□ -0.11
MMP11P24347 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP11P24347 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP11P24347 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
MMP11P24347 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP11P24347 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
MMP11P24347 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.39□□□□□ -0.11
MMP11P24347 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
MMP11P24347 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.38□□□□□ -0.11
MMP11P24347 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 LINC00552-201ENST00000625151 2579 ntBASIC14.38□□□□□ -0.11
MMP11P24347 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.38□□□□□ -0.11
MMP11P24347 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.38□□□□□ -0.11
MMP11P24347 AC007686.3-201ENST00000619017 3487 ntBASIC14.38□□□□□ -0.11
MMP11P24347 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.38□□□□□ -0.11
MMP11P24347 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.38□□□□□ -0.11
MMP11P24347 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
MMP11P24347 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
MMP11P24347 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 AL390755.1-201ENST00000623716 2027 ntBASIC14.38□□□□□ -0.11
MMP11P24347 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.38□□□□□ -0.11
MMP11P24347 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 AL645937.2-201ENST00000396808 931 ntBASIC14.38□□□□□ -0.11
MMP11P24347 ACTBP8-201ENST00000403258 1108 ntBASIC14.38□□□□□ -0.11
MMP11P24347 ACTBP11-201ENST00000436287 1126 ntBASIC14.38□□□□□ -0.11
MMP11P24347 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.38□□□□□ -0.11
MMP11P24347 AC004066.1-201ENST00000502488 802 ntBASIC14.38□□□□□ -0.11
MMP11P24347 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.38□□□□□ -0.11
MMP11P24347 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.38□□□□□ -0.11
MMP11P24347 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.38□□□□□ -0.11
MMP11P24347 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.38□□□□□ -0.11
MMP11P24347 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.38□□□□□ -0.11
MMP11P24347 AC008687.7-202ENST00000637404 953 ntBASIC14.38□□□□□ -0.11
MMP11P24347 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.38□□□□□ -0.11
MMP11P24347 AL645728.2-202ENST00000641679 227 ntBASIC14.38□□□□□ -0.11
MMP11P24347 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
MMP11P24347 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
MMP11P24347 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.38□□□□□ -0.11
MMP11P24347 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.38□□□□□ -0.11
MMP11P24347 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.38□□□□□ -0.11
MMP11P24347 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 AC026748.1-201ENST00000624349 3251 ntBASIC14.38□□□□□ -0.11
MMP11P24347 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
MMP11P24347 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.38□□□□□ -0.11
MMP11P24347 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
MMP11P24347 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.38□□□□□ -0.11
MMP11P24347 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.38□□□□□ -0.11
MMP11P24347 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MMP11P24347 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
MMP11P24347 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.37□□□□□ -0.11
MMP11P24347 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MMP11P24347 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MMP11P24347 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MMP11P24347 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
MMP11P24347 AL138709.1-201ENST00000614840 1693 ntBASIC14.37□□□□□ -0.11
MMP11P24347 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
MMP11P24347 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.37□□□□□ -0.11
MMP11P24347 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
MMP11P24347 FAM86MP-201ENST00000340703 885 ntBASIC14.37□□□□□ -0.11
MMP11P24347 KLF2P2-201ENST00000416807 1039 ntBASIC14.37□□□□□ -0.11
MMP11P24347 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC14.37□□□□□ -0.11
MMP11P24347 AC026954.1-201ENST00000429771 1293 ntBASIC14.37□□□□□ -0.11
MMP11P24347 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC14.37□□□□□ -0.11
MMP11P24347 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC14.37□□□□□ -0.11
MMP11P24347 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
MMP11P24347 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.37□□□□□ -0.11
MMP11P24347 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
MMP11P24347 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.37□□□□□ -0.11
MMP11P24347 AC023310.1-201ENST00000554836 735 ntBASIC14.37□□□□□ -0.11
MMP11P24347 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.37□□□□□ -0.11
MMP11P24347 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.37□□□□□ -0.11
MMP11P24347 PRSS30P-206ENST00000641773 873 ntBASIC14.37□□□□□ -0.11
MMP11P24347 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
MMP11P24347 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.37□□□□□ -0.11
MMP11P24347 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
MMP11P24347 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
MMP11P24347 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms