Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MS4A1P11836 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MS4A1P11836 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
MS4A1P11836 AC134915.1-201ENST00000426461 574 ntBASIC19.46■□□□□ 0.71
MS4A1P11836 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC19.46■□□□□ 0.71
MS4A1P11836 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC19.46■□□□□ 0.71
MS4A1P11836 GLI4-203ENST00000517468 963 ntTSL 5 BASIC19.46■□□□□ 0.71
MS4A1P11836 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.46■□□□□ 0.71
MS4A1P11836 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.46■□□□□ 0.71
MS4A1P11836 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC19.46■□□□□ 0.71
MS4A1P11836 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
MS4A1P11836 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MS4A1P11836 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
MS4A1P11836 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
MS4A1P11836 AC117489.1-201ENST00000625169 3217 ntBASIC19.46■□□□□ 0.71
MS4A1P11836 AL158070.2-201ENST00000623713 1621 ntBASIC19.46■□□□□ 0.71
MS4A1P11836 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
MS4A1P11836 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC19.46■□□□□ 0.71
MS4A1P11836 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MS4A1P11836 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MS4A1P11836 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MS4A1P11836 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
MS4A1P11836 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MS4A1P11836 AL391825.1-201ENST00000457671 1364 ntBASIC19.45■□□□□ 0.7
MS4A1P11836 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
MS4A1P11836 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MS4A1P11836 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MS4A1P11836 OR2I1P-210ENST00000642037 4691 ntBASIC19.45■□□□□ 0.7
MS4A1P11836 AL137784.3-201ENST00000623858 2288 ntBASIC19.45■□□□□ 0.7
MS4A1P11836 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
MS4A1P11836 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MS4A1P11836 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC19.45■□□□□ 0.7
MS4A1P11836 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC19.45■□□□□ 0.7
MS4A1P11836 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC19.45■□□□□ 0.7
MS4A1P11836 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MS4A1P11836 TEX30-203ENST00000376022 828 ntTSL 2 BASIC19.45■□□□□ 0.7
MS4A1P11836 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
MS4A1P11836 DFFBP1-201ENST00000433250 979 ntBASIC19.45■□□□□ 0.7
MS4A1P11836 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MS4A1P11836 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.45■□□□□ 0.7
MS4A1P11836 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
MS4A1P11836 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MS4A1P11836 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.45■□□□□ 0.7
MS4A1P11836 PRSS30P-206ENST00000641773 873 ntBASIC19.45■□□□□ 0.7
MS4A1P11836 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
MS4A1P11836 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC19.45■□□□□ 0.7
MS4A1P11836 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
MS4A1P11836 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MS4A1P11836 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MS4A1P11836 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC19.45■□□□□ 0.7
MS4A1P11836 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
MS4A1P11836 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MS4A1P11836 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
MS4A1P11836 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MS4A1P11836 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
MS4A1P11836 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
MS4A1P11836 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MS4A1P11836 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A1P11836 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC19.44■□□□□ 0.7
MS4A1P11836 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC19.44■□□□□ 0.7
MS4A1P11836 AC092135.3-201ENST00000624151 1846 ntBASIC19.44■□□□□ 0.7
MS4A1P11836 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
MS4A1P11836 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A1P11836 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC19.44■□□□□ 0.7
MS4A1P11836 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
MS4A1P11836 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A1P11836 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A1P11836 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
MS4A1P11836 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A1P11836 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A1P11836 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.44■□□□□ 0.7
MS4A1P11836 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A1P11836 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A1P11836 AL442647.2-201ENST00000429864 857 ntBASIC19.44■□□□□ 0.7
MS4A1P11836 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
MS4A1P11836 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC19.44■□□□□ 0.7
MS4A1P11836 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.44■□□□□ 0.7
MS4A1P11836 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.44■□□□□ 0.7
MS4A1P11836 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A1P11836 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.44■□□□□ 0.7
MS4A1P11836 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.44■□□□□ 0.7
MS4A1P11836 AC093726.1-201ENST00000608064 963 ntBASIC19.44■□□□□ 0.7
MS4A1P11836 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.44■□□□□ 0.7
MS4A1P11836 BX539320.1-201ENST00000623759 877 ntBASIC19.44■□□□□ 0.7
MS4A1P11836 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
MS4A1P11836 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
MS4A1P11836 AC097359.2-201ENST00000604992 2389 ntBASIC19.44■□□□□ 0.7
MS4A1P11836 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A1P11836 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A1P11836 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A1P11836 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A1P11836 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A1P11836 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
MS4A1P11836 INTS4P2-202ENST00000614726 2019 ntBASIC19.44■□□□□ 0.7
MS4A1P11836 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC19.44■□□□□ 0.7
MS4A1P11836 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A1P11836 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MS4A1P11836 PES1-204ENST00000402284 2144 ntTSL 5 BASIC19.43■□□□□ 0.7
MS4A1P11836 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms