Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 RN7SL560P-201ENST00000577943 264 ntBASIC15.81■□□□□ 0.12
BEST1O76090 PPY2P-201ENST00000582808 702 ntBASIC15.81■□□□□ 0.12
BEST1O76090 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.81■□□□□ 0.12
BEST1O76090 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.81■□□□□ 0.12
BEST1O76090 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BEST1O76090 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
BEST1O76090 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.81■□□□□ 0.12
BEST1O76090 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.81■□□□□ 0.12
BEST1O76090 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.8■□□□□ 0.12
BEST1O76090 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 AL023775.1-201ENST00000454907 1746 ntBASIC15.8■□□□□ 0.12
BEST1O76090 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.8■□□□□ 0.12
BEST1O76090 AC018529.2-202ENST00000611482 3087 ntBASIC15.8■□□□□ 0.12
BEST1O76090 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 TUBB1P2-201ENST00000422712 1306 ntBASIC15.8■□□□□ 0.12
BEST1O76090 TUBB1P1-201ENST00000503144 1300 ntBASIC15.8■□□□□ 0.12
BEST1O76090 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 CHMP1AP1-201ENST00000445563 662 ntBASIC15.8■□□□□ 0.12
BEST1O76090 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
BEST1O76090 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.8■□□□□ 0.12
BEST1O76090 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.8■□□□□ 0.12
BEST1O76090 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.8■□□□□ 0.12
BEST1O76090 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.8■□□□□ 0.12
BEST1O76090 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.8■□□□□ 0.12
BEST1O76090 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BEST1O76090 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.8■□□□□ 0.12
BEST1O76090 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.8■□□□□ 0.12
BEST1O76090 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.79■□□□□ 0.12
BEST1O76090 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.79■□□□□ 0.12
BEST1O76090 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BEST1O76090 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST1O76090 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST1O76090 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC15.79■□□□□ 0.12
BEST1O76090 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BEST1O76090 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.79■□□□□ 0.12
BEST1O76090 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
BEST1O76090 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST1O76090 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST1O76090 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST1O76090 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST1O76090 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.79■□□□□ 0.12
BEST1O76090 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.79■□□□□ 0.12
BEST1O76090 GOLGA2P4-201ENST00000441462 777 ntBASIC15.79■□□□□ 0.12
BEST1O76090 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.79■□□□□ 0.12
BEST1O76090 AL355994.2-201ENST00000447882 704 ntBASIC15.79■□□□□ 0.12
BEST1O76090 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.79■□□□□ 0.12
BEST1O76090 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.79■□□□□ 0.12
BEST1O76090 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.79■□□□□ 0.12
BEST1O76090 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.79■□□□□ 0.12
BEST1O76090 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.79■□□□□ 0.12
BEST1O76090 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
BEST1O76090 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST1O76090 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST1O76090 SALL4P5-201ENST00000419001 1760 ntBASIC15.79■□□□□ 0.12
BEST1O76090 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
BEST1O76090 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.79■□□□□ 0.12
BEST1O76090 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.79■□□□□ 0.12
BEST1O76090 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST1O76090 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.79■□□□□ 0.12
BEST1O76090 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST1O76090 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BEST1O76090 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
BEST1O76090 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.79■□□□□ 0.12
BEST1O76090 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.79■□□□□ 0.12
BEST1O76090 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
BEST1O76090 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BEST1O76090 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.78■□□□□ 0.12
BEST1O76090 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BEST1O76090 LINC01101-201ENST00000622953 1884 ntBASIC15.78■□□□□ 0.12
BEST1O76090 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BEST1O76090 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BEST1O76090 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BEST1O76090 FER1L4-210ENST00000615531 5998 ntBASIC15.78■□□□□ 0.12
BEST1O76090 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.78■□□□□ 0.12
BEST1O76090 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
BEST1O76090 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.78■□□□□ 0.12
BEST1O76090 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
BEST1O76090 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
BEST1O76090 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms